Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29847	Idi1	isopentenyl-diphosphate delta isomerase	13		319554
Gene Ontology	carotenoid biosynthesis | cholesterol biosynthesis | isomerase activity | isopentenyl-diphosphate delta-isomerase activity | isoprenoid biosynthesis | magnesium ion binding | peroxisome | steroid biosynthesis | sterol biosynthesis
Human Homolog	LOC203010[similar to IDI1 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGGGAAGG (6) 1.6 0.0016 P8 Cb GC GCCAGCAAAA (8) 1.6 0.0016 Cb medulloblastoma CCCGGGCTCG (2) 4.6 0.0046 Cb medulloblastoma GCCAGCAAAA (8) 2.3 0.0023 Cb medulloblastoma GCCAGCAACA (4) 2.3 0.0023 Cb medulloblastoma GCTGGGCCTG (5) 2.3 0.0023 P8 GC+1d culture CCCGGGCTCG (2) 2.3 0.0023 P8 GC+1d culture GCCAGCAACA (4) 2.3 0.0023 P8 GC+1d culture AAGGGGAAGG (6) 1.1 0.0011 P8 GC+SHH+1d culture GCCAGCAACA (4) 8.2 0.0082 P8 GC+SHH+1d culture AAGGGGAAGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGTACACTC 1.2 0.0012 3T3 fibroblasts GCCAGCAAAA (8) 7 0.007 3T3 fibroblasts GCCAGCAACA (4) 7 0.007 E15 cortex GCCAGCAAAA (8) 4.9 0.0049 P1 cortex GCCAGCAACA (4) 4.5 0.0045 Hypothalamus GCCAGCAACA (4) 3.6 0.0036 Hypothalamus AAGGGGAAGG (6) 1.8 0.0018 Hypothalamus GCTGGGCCTG (5) 1.8 0.0018 Hypothalamus TGCGGCACAG 1.8 0.0018 E12.5 retina GCCAGCAACA (4) 3.8 0.0038 E14.5 retina TGCGGCACAG 3.6 0.0036 E14.5 retina GCCAGCAACA (4) 1.8 0.0018 E16.5 retina GCCAGCAACA (4) 3.6 0.0036 E16.5 retina CCCGGGCTCG (2) 1.8 0.0018 E18.5 retina GCCAGCAACA (4) 1.8 0.0018 E18.5 retina TGGTACACTC 1.8 0.0018 P0.5 retina GCCAGCAACA (4) 9.8 0.0098 P0.5 retina TGGTACACTC 2 0.002 P4.5 retina CCCGGGCTCG (2) 2 0.002 P6.5 retina GCCAGCAAAA (8) 1.7 0.0017 P10.5 crx- retina GCCAGCAACA (4) 1.9 0.0019 P10.5 crx+ retina GCCAGCAACA (4) 1.9 0.0019 Adult retinal GCCAGCAACA (4) 1.9 0.0019 ONL GCCAGCAACA (4) 1.9 0.0019