Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29923
Sumo2
SMT3 suppressor of mif two 3 homolog 2 (yeast)
11
170930
Mm.29923
Yeats2
YEATS domain containing 2
16
208146
Human Homolog
YEATS2[YEATS domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 105 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGGGCAATC
(
4
)
117.5
0.1175
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TAACAGCTAC (
5
)
4.9
0.0049
P8 Cb GC
CGCCACCACG (
19
)
3.3
0.0033
P8 Cb GC
CTCATTCAGC
(
4
)
3.3
0.0033
P8 Cb GC
GCCGACGAGA
(
3
)
1.6
0.0016
Cb medulloblastoma
TAGGGCAATC
(
4
)
67.1
0.0671
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
CGCCACCACG (
19
)
6.9
0.0069
Cb medulloblastoma
TAGGGCAATT
(
2
)
4.6
0.0046
Cb medulloblastoma
TAACAGCTAC (
5
)
2.3
0.0023
P8 GC+1d culture
TAGGGCAATC
(
4
)
69.6
0.0696
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TAACAGCTAC (
5
)
8
0.008
P8 GC+1d culture
CGCCACCACG (
19
)
2.3
0.0023
P8 GC+SHH+1d culture
TAGGGCAATC
(
4
)
73.8
0.0738
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
CGCCACCACG (
19
)
9.4
0.0094
P8 GC+SHH+1d culture
TAACAGCTAC (
5
)
7
0.007
P8 GC+SHH+1d culture
CTCATTCAGC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCGACGAGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGATGGAGAT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGGGCAATT
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
TAGGGCAATC
(
4
)
14
0.014
3T3 fibroblasts
CCATTAATCC (
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
TAGGGCAATC
(
4
)
24.7
0.0247
E15 cortex
CGCCACCACG (
19
)
9.9
0.0099
E15 cortex
GCCGACGAGA
(
3
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TAGGGCAATC
(
4
)
13.6
0.0136
P1 cortex
AGATGGAGAT
(
4
)
4.5
0.0045
P1 cortex
CGCCACCACG (
19
)
4.5
0.0045
P1 cortex
TAACAGCTAC (
5
)
4.5
0.0045
Hypothalamus
TAGGGCAATC
(
4
)
29
0.029
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
TAACAGCTAC (
5
)
10.9
0.0109
Hypothalamus
CGCCACCACG (
19
)
9.1
0.0091
E12.5 retina
TAGGGCAATC
(
4
)
107
0.107
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
TAACAGCTAC (
5
)
5.6
0.0056
E12.5 retina
CGCCACCACG (
19
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TAGGGCAATC
(
4
)
94.7
0.0947
E14.5 retina
TAACAGCTAC (
5
)
7.3
0.0073
E14.5 retina
CCATTAATCC (
2
)
1.8
0.0018
E14.5 retina
CGCCACCACG (
19
)
1.8
0.0018
E16.5 retina
TAGGGCAATC
(
4
)
74.3
0.0743
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
CGCCACCACG (
19
)
9.1
0.0091
E16.5 retina
TAACAGCTAC (
5
)
7.2
0.0072
E16.5 retina
AGATGGAGAT
(
4
)
3.6
0.0036
E16.5 retina
CTCATTCAGC
(
4
)
3.6
0.0036
E16.5 retina
GCCGACGAGA
(
3
)
3.6
0.0036
E16.5 retina
CCATTAATCC (
2
)
1.8
0.0018
E18.5 retina
TAGGGCAATC
(
4
)
131
0.131
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TAACAGCTAC (
5
)
9.1
0.0091
E18.5 retina
TAGGGCAATT
(
2
)
3.6
0.0036
E18.5 retina
CGCCACCACG (
19
)
1.8
0.0018
E18.5 retina
GCGAGCGCCG
(
3
)
1.8
0.0018
P0.5 retina
TAGGGCAATC
(
4
)
94.2
0.0942
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
TAACAGCTAC (
5
)
2
0.002
P2.5 retina
TAGGGCAATC
(
4
)
93.3
0.0933
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CGCCACCACG (
19
)
8.8
0.0088
P2.5 retina
TAACAGCTAC (
5
)
5.3
0.0053
P2.5 retina
CTCATTCAGC
(
4
)
3.5
0.0035
P4.5 retina
TAGGGCAATC
(
4
)
107
0.107
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
CGCCACCACG (
19
)
7.9
0.0079
P4.5 retina
GCGAGCGCCG
(
3
)
2
0.002
P4.5 retina
TAACAGCTAC (
5
)
2
0.002
P4.5 retina
TAGGGCAATT
(
2
)
2
0.002
P6.5 retina
TAGGGCAATC
(
4
)
71.7
0.0717
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
CGCCACCACG (
19
)
5
0.005
P6.5 retina
TAACAGCTAC (
5
)
5
0.005
P10.5 crx- retina
TAGGGCAATC
(
4
)
96.6
0.0966
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
CGCCACCACG (
19
)
7.4
0.0074
P10.5 crx- retina
GCCGACGAGA
(
3
)
5.6
0.0056
P10.5 crx- retina
TAACAGCTAC (
5
)
5.6
0.0056
P10.5 crx- retina
AGATGGAGAT
(
4
)
1.9
0.0019
P10.5 crx- retina
CTCATTCAGC
(
4
)
1.9
0.0019
P10.5 crx- retina
GCGAGCGCCG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAGGGCAATC
(
4
)
78.8
0.0788
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TAACAGCTAC (
5
)
7.7
0.0077
P10.5 crx+ retina
CGCCACCACG (
19
)
3.8
0.0038
P10.5 crx+ retina
CTCATTCAGC
(
4
)
3.8
0.0038
P10.5 crx+ retina
GCCGACGAGA
(
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TAGGGCAATC
(
4
)
29.6
0.0296
Adult retinal
CGCCACCACG (
19
)
24.1
0.0241
Adult retinal
CCATTAATCC (
2
)
1.9
0.0019
Adult retinal
GCGAGCGCCG
(
3
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TAGGGCAATC
(
4
)
23
0.023
ONL
CGCCACCACG (
19
)
15.3
0.0153
ONL
CTCATTCAGC
(
4
)
1.9
0.0019
ONL
GCCGACGAGA
(
3
)
1.9
0.0019
ONL
TAACAGCTAC (
5
)
1.9
0.0019
