Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29924	Arl6ip1	ADP-ribosylation factor-like 6 interacting protein 1	7		54208
Gene Ontology	cotranslational membrane targeting | cytoplasm | cytosol | integral to membrane | integral to membrane | protein binding | translocon
Human Homolog	ARL6IP[ADP-ribosylation factor-like 6 interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTACGAGT 22.8 0.0228 P8 Cb GC TTCTATGAGT (3) 9.8 0.0098 P8 Cb GC GGATCATTCT (6) 8.2 0.0082 P8 Cb GC GGTGTGGTTT (3) 3.3 0.0033 P8 Cb GC CTGAAGATCA (8) 1.6 0.0016 Cb medulloblastoma TTCTATGAGT (3) 6.9 0.0069 Cb medulloblastoma GGATCATTCT (6) 4.6 0.0046 P8 GC+1d culture TTCTATGAGT (3) 18.3 0.0183 P8 GC+1d culture TTCTACGAGT 12.6 0.0126 P8 GC+1d culture GAATAAGATA 2.3 0.0023 P8 GC+1d culture GGTTAAGGAG 1.1 0.0011 P8 GC+1d culture TGTGTTTGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTCTACGAGT 18.7 0.0187 P8 GC+SHH+1d culture TTCTATGAGT (3) 15.2 0.0152 P8 GC+SHH+1d culture GGATCATTCT (6) 2.3 0.0023 P8 GC+SHH+1d culture CTGAAGATCA (8) 1.2 0.0012 P8 GC+SHH+1d culture GAATAAGATA 1.2 0.0012 P8 GC+SHH+1d culture TTTTACGAGT 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTGTGT (5) 1.2 0.0012 3T3 fibroblasts GGATCATTCT (6) 3.5 0.0035 E15 cortex TTCTACGAGT 4.9 0.0049 P1 cortex GGATCATTCT (6) 9.1 0.0091 P1 cortex AAATCTTTGC (3) 4.5 0.0045 P1 cortex TTTTCTGTGT (5) 4.5 0.0045 Hypothalamus TTCTACGAGT 34.4 0.0344 Hypothalamus AAATCTTTGC (3) 1.8 0.0018 Hypothalamus GAATAAGATA 1.8 0.0018 Hypothalamus GGATCATTCT (6) 1.8 0.0018 E12.5 retina TTCTACGAGT 16.9 0.0169 E12.5 retina GGATCATTCT (6) 3.8 0.0038 E12.5 retina CTGAAGATCA (8) 1.9 0.0019 E14.5 retina TTCTACGAGT 31 0.031 E14.5 retina GGATCATTCT (6) 3.6 0.0036 E14.5 retina CTGAAGATCA (8) 1.8 0.0018 E16.5 retina TTCTACGAGT 34.4 0.0344 E16.5 retina GGTTAAGGAG 1.8 0.0018 E18.5 retina TTCTACGAGT 29.1 0.0291 E18.5 retina AAATCTTTGC (3) 1.8 0.0018 E18.5 retina GAATAAGATA 1.8 0.0018 E18.5 retina GGATCATTCT (6) 1.8 0.0018 E18.5 retina GGTTAAGGAG 1.8 0.0018 E18.5 retina TTTTACGAGT 1.8 0.0018 P0.5 retina TTCTACGAGT 13.7 0.0137 P0.5 retina CTGAAGATCA (8) 2 0.002 P2.5 retina TTCTACGAGT 40.5 0.0405 P2.5 retina CTGAAGATCA (8) 3.5 0.0035 P2.5 retina GGTTAAGGAG 3.5 0.0035 P2.5 retina TTTTCTGTGT (5) 3.5 0.0035 P2.5 retina GGTGTGGTTT (3) 1.8 0.0018 P2.5 retina TGTGTTTGTT (2) 1.8 0.0018 P4.5 retina TTCTACGAGT 17.8 0.0178 P4.5 retina TGTGTTTGTT (2) 2 0.002 P4.5 retina TTTTACGAGT 2 0.002 P6.5 retina TTCTACGAGT 26.7 0.0267 P6.5 retina GGATCATTCT (6) 3.3 0.0033 P6.5 retina AAATCTTTGC (3) 1.7 0.0017 P6.5 retina GGTTAAGGAG 1.7 0.0017 P10.5 crx- retina TTCTATGAGT (3) 7.4 0.0074 P10.5 crx- retina CTGAAGATCA (8) 1.9 0.0019 P10.5 crx+ retina TTCTATGAGT (3) 9.6 0.0096 P10.5 crx+ retina CTGAAGATCA (8) 1.9 0.0019 Adult retinal TTCTACGAGT 14.8 0.0148 Adult retinal GGTTAAGGAG 1.9 0.0019 ONL TTCTACGAGT 3.8 0.0038 ONL GAATAAGATA 1.9 0.0019 ONL TTCTATGAGT (3) 1.9 0.0019 ONL TTTTACGAGT 1.9 0.0019