Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299312	Ssfa1	sperm specific antigen 1	15		20826
Gene Ontology	fertilization (sensu Animalia) | nucleus | plasma membrane | protein biosynthesis | ribosome | RNA binding | spliceosome complex | structural constituent of ribosome
Human Homolog	NHP2L1[NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCATTATTG (3) 13.1 0.0131 P8 Cb GC TACTATTTTC (3) 4.9 0.0049 Cb medulloblastoma TTCATTATTG (3) 13.9 0.0139 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 Cb medulloblastoma TACTATTTTC (3) 2.3 0.0023 Cb medulloblastoma TGAGGGAGAA 2.3 0.0023 P8 GC+1d culture TTCATTATTG (3) 14.8 0.0148 P8 GC+1d culture TACTATTTTC (3) 3.4 0.0034 P8 GC+1d culture TATCTTCTCT (4) 1.1 0.0011 P8 GC+1d culture TGAGGGAGAA 1.1 0.0011 P8 GC+SHH+1d culture TTCATTATTG (3) 10.5 0.0105 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture TACTATTTTC (3) 4.7 0.0047 P8 GC+SHH+1d culture TATCTTCTCT (4) 4.7 0.0047 P8 GC+SHH+1d culture TGAGGGAGAA 1.2 0.0012 P1 cortex CTAATAAATA (2) 4.5 0.0045 P1 cortex TTCATTATTG (3) 4.5 0.0045 Hypothalamus TTCATTATTG (3) 23.5 0.0235 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus TACTATTTTC (3) 3.6 0.0036 Hypothalamus TGAGGGAGAA 3.6 0.0036 Hypothalamus CTAATAAATA (2) 1.8 0.0018 E12.5 retina TTCATTATTG (3) 30 0.03 E12.5 retina TACTATTTTC (3) 11.3 0.0113 E12.5 retina CTAATAAATA (2) 1.9 0.0019 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E14.5 retina TTCATTATTG (3) 14.6 0.0146 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina CTGCACCTGC 1.8 0.0018 E14.5 retina TACTATTTTC (3) 1.8 0.0018 E14.5 retina TATCTTCTCT (4) 1.8 0.0018 E16.5 retina TTCATTATTG (3) 16.3 0.0163 E16.5 retina TATCTTCTCT (4) 3.6 0.0036 E16.5 retina TACTATTTTC (3) 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina TTCATTATTG (3) 23.6 0.0236 E18.5 retina TACTATTTTC (3) 12.7 0.0127 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 P0.5 retina TTCATTATTG (3) 3.9 0.0039 P0.5 retina TATCTTCTCT (4) 2 0.002 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina TTCATTATTG (3) 12.3 0.0123 P2.5 retina TACTATTTTC (3) 8.8 0.0088 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P4.5 retina TTCATTATTG (3) 7.9 0.0079 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina TACTATTTTC (3) 2 0.002 P4.5 retina TATCTTCTCT (4) 2 0.002 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P6.5 retina TTCATTATTG (3) 5 0.005 P10.5 crx- retina TTCATTATTG (3) 14.9 0.0149 P10.5 crx- retina TACTATTTTC (3) 5.6 0.0056 P10.5 crx- retina CTGCACCTGC 3.7 0.0037 P10.5 crx- retina TAACTACAAC (2) 3.7 0.0037 P10.5 crx- retina TGAGGGAGAA 1.9 0.0019 P10.5 crx+ retina TACTATTTTC (3) 5.8 0.0058 P10.5 crx+ retina TTCATTATTG (3) 5.8 0.0058 P10.5 crx+ retina TAACTACAAC (2) 3.8 0.0038 Adult retinal TTCATTATTG (3) 5.6 0.0056 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL TTCATTATTG (3) 3.8 0.0038 ONL TACTATTTTC (3) 1.9 0.0019