Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299604	Csda	cold shock domain protein A	6	6 F3	56449
Gene Ontology	DNA binding | nucleus
Human Homolog	CSDA[cold shock domain protein A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACTTGGAA (2) 3.3 0.0033 P8 Cb GC ATTTAAGAAG 3.3 0.0033 P8 Cb GC AGCGAGGCGG (2) 1.6 0.0016 P8 Cb GC GGGATTGCCC (2) 1.6 0.0016 P8 Cb GC TGGTATTAAT (2) 1.6 0.0016 Cb medulloblastoma ATTTAAGAAG 2.3 0.0023 P8 GC+1d culture ATTTAAGAAG 5.7 0.0057 P8 GC+1d culture AGCGAGGCGG (2) 1.1 0.0011 P8 GC+1d culture GGGATTGCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture ATTTAAGAAG 5.9 0.0059 P8 GC+SHH+1d culture GGGATTGCCC (2) 3.5 0.0035 P8 GC+SHH+1d culture ACACTTGGAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGTATTAAT (2) 1.2 0.0012 3T3 fibroblasts AGCGAGGCGG (2) 7 0.007 3T3 fibroblasts GGGATTGCCC (2) 3.5 0.0035 E15 cortex ACACTTGGAA (2) 4.9 0.0049 E15 cortex AGCGAGGCGG (2) 4.9 0.0049 E15 cortex ATTTAAGAAG 4.9 0.0049 P1 cortex ATTTAAGAAG 4.5 0.0045 Hypothalamus ATTTAAGAAG 1.8 0.0018 E12.5 retina GGGATTGCCC (2) 1.9 0.0019 E14.5 retina AAGACCTGAG (5) 3.6 0.0036 E14.5 retina ACACTTGGAA (2) 3.6 0.0036 E14.5 retina GGGATTGCCC (2) 3.6 0.0036 E14.5 retina ATTTAAGAAG 1.8 0.0018 E16.5 retina TGGTATTAAT (2) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina ATTTAAGAAG 1.8 0.0018 E18.5 retina ACACTTGGAA (2) 3.6 0.0036 E18.5 retina ATTTAAGAAG 1.8 0.0018 E18.5 retina TGGTATTAAT (2) 1.8 0.0018 P0.5 retina ACACTTGGAA (2) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina ATTTAAGAAG 1.8 0.0018 P2.5 retina GGGATTGCCC (2) 1.8 0.0018 P4.5 retina TGGTATTAAT (2) 4 0.004 P4.5 retina ACACTTGGAA (2) 2 0.002 P4.5 retina ATTTAAGAAG 2 0.002 P4.5 retina GGGATTGCCC (2) 2 0.002 P6.5 retina ACACTTGGAA (2) 8.3 0.0083 P6.5 retina ATTTAAGAAG 5 0.005 P6.5 retina GGGATTGCCC (2) 1.7 0.0017 P10.5 crx- retina ATTTAAGAAG 14.9 0.0149 P10.5 crx- retina GGGATTGCCC (2) 1.9 0.0019 P10.5 crx- retina TGGTATTAAT (2) 1.9 0.0019 P10.5 crx+ retina ACACTTGGAA (2) 7.7 0.0077 P10.5 crx+ retina ATTTAAGAAG 7.7 0.0077 P10.5 crx+ retina TGGTATTAAT (2) 7.7 0.0077 P10.5 crx+ retina GGGATTGCCC (2) 1.9 0.0019 Adult retinal ATTTAAGAAG 11.1 0.0111 Adult retinal GGGATTGCCC (2) 7.4 0.0074 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal ACACTTGGAA (2) 1.9 0.0019 Adult retinal AGCGAGGCGG (2) 1.9 0.0019 ONL ATTTAAGAAG 34.5 0.0345 ONL TGGTATTAAT (2) 9.6 0.0096 ONL ACACTTGGAA (2) 5.7 0.0057 ONL AAGACCTGAG (5) 3.8 0.0038 ONL GGGATTGCCC (2) 3.8 0.0038