Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29965
2810454F19Rik
RIKEN cDNA 2810454F19 gene
15
72802
Mm.29965
2410104I19Rik
RIKEN cDNA 2410104I19 gene
15
67959
Human Homolog
SIAHBP1[fuse-binding protein-interacting repressor]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 78 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCAGAGA
(
5
)
11.4
0.0114
P8 Cb GC
GTGGACCCCA
(
7
)
3.3
0.0033
P8 Cb GC
CACATCTGTA (
5
)
1.6
0.0016
P8 Cb GC
GAGAAAACCA (
7
)
1.6
0.0016
P8 Cb GC
GAGAATTCCA (
12
)
1.6
0.0016
P8 Cb GC
TGCTCCTGCT
(
2
)
1.6
0.0016
Cb medulloblastoma
CACATCTGTA (
5
)
6.9
0.0069
Cb medulloblastoma
GTGGACCCCA
(
7
)
4.6
0.0046
Cb medulloblastoma
AACATCAAGG (
8
)
2.3
0.0023
Cb medulloblastoma
CTGCTGCTGT (
7
)
2.3
0.0023
Cb medulloblastoma
GCCTCAGAGA
(
5
)
2.3
0.0023
P8 GC+1d culture
GCCTCAGAGA
(
5
)
12.6
0.0126
P8 GC+1d culture
GTGGACCCCA
(
7
)
3.4
0.0034
P8 GC+1d culture
CTGCTGCTGT (
7
)
2.3
0.0023
P8 GC+1d culture
CACATCTGTA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCTCAGAGA
(
5
)
9.4
0.0094
P8 GC+SHH+1d culture
GTGGACCCCA
(
7
)
4.7
0.0047
P8 GC+SHH+1d culture
CTGCTGCTGT (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
CACATCTGTA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGAAAACCA (
7
)
1.2
0.0012
3T3 fibroblasts
GCCTCAGAGA
(
5
)
21
0.021
3T3 fibroblasts
CTGCTGCTGT (
7
)
3.5
0.0035
3T3 fibroblasts
GTGGACCCCA
(
7
)
3.5
0.0035
E15 cortex
GAGAATTCCA (
12
)
4.9
0.0049
E15 cortex
GCCTCAGAGA
(
5
)
4.9
0.0049
E15 cortex
GCTGCCCAGG (
10
)
4.9
0.0049
P1 cortex
GCCTCAGAGA
(
5
)
9.1
0.0091
Hypothalamus
GCCTCAGAGA
(
5
)
7.2
0.0072
Hypothalamus
GTGGACCCCA
(
7
)
7.2
0.0072
Hypothalamus
CTGCTGCTGT (
7
)
3.6
0.0036
Hypothalamus
CACATCTGTA (
5
)
1.8
0.0018
Hypothalamus
TGCTCCTGCT
(
2
)
1.8
0.0018
E12.5 retina
GTGGACCCCA
(
7
)
7.5
0.0075
E12.5 retina
GCCTCAGAGA
(
5
)
5.6
0.0056
E14.5 retina
GCCTCAGAGA
(
5
)
9.1
0.0091
E14.5 retina
GAGAATTCCA (
12
)
3.6
0.0036
E14.5 retina
CTGCTGCTGT (
7
)
1.8
0.0018
E16.5 retina
GCCTCAGAGA
(
5
)
16.3
0.0163
E16.5 retina
GAGAATTCCA (
12
)
5.4
0.0054
E16.5 retina
CTGCTGCTGT (
7
)
3.6
0.0036
E16.5 retina
GTGGACCCCA
(
7
)
3.6
0.0036
E16.5 retina
GCTGCCCAGG (
10
)
1.8
0.0018
E18.5 retina
GCCTCAGAGA
(
5
)
7.3
0.0073
E18.5 retina
GAGAATTCCA (
12
)
1.8
0.0018
P0.5 retina
GCCTCAGAGA
(
5
)
13.7
0.0137
P0.5 retina
CACATCTGTA (
5
)
2
0.002
P0.5 retina
CTGCTGCTGT (
7
)
2
0.002
P0.5 retina
GAGAATTCCA (
12
)
2
0.002
P0.5 retina
GTGGACCCCA
(
7
)
2
0.002
P2.5 retina
GCCTCAGAGA
(
5
)
10.6
0.0106
P2.5 retina
CTGCTGCTGT (
7
)
1.8
0.0018
P2.5 retina
GTGGACCCCA
(
7
)
1.8
0.0018
P4.5 retina
GCCTCAGAGA
(
5
)
9.9
0.0099
P4.5 retina
CACATCTGTA (
5
)
4
0.004
P4.5 retina
GTGGACCCCA
(
7
)
4
0.004
P4.5 retina
CTGCTGCTGT (
7
)
2
0.002
P4.5 retina
GAGAATTCCA (
12
)
2
0.002
P6.5 retina
GCCTCAGAGA
(
5
)
11.7
0.0117
P6.5 retina
GTGGACCCCA
(
7
)
5
0.005
P6.5 retina
GAGAATTCCA (
12
)
1.7
0.0017
P10.5 crx- retina
GCCTCAGAGA
(
5
)
22.3
0.0223
P10.5 crx- retina
CTGCTGCTGT (
7
)
7.4
0.0074
P10.5 crx- retina
CACATCTGTA (
5
)
1.9
0.0019
P10.5 crx- retina
GCTGCCCAGG (
10
)
1.9
0.0019
P10.5 crx+ retina
GCCTCAGAGA
(
5
)
15.4
0.0154
P10.5 crx+ retina
GTGGACCCCA
(
7
)
15.4
0.0154
P10.5 crx+ retina
CTGCTGCTGT (
7
)
3.8
0.0038
P10.5 crx+ retina
AACATCAAGG (
8
)
1.9
0.0019
P10.5 crx+ retina
GAGAAAACCA (
7
)
1.9
0.0019
Adult retinal
GCCTCAGAGA
(
5
)
13
0.013
Adult retinal
CTGCTGCTGT (
7
)
3.7
0.0037
Adult retinal
GTGGACCCCA
(
7
)
3.7
0.0037
Adult retinal
GCTGCCCAGG (
10
)
1.9
0.0019
Adult retinal
TGCTCCTGCT
(
2
)
1.9
0.0019
ONL
GCCTCAGAGA
(
5
)
9.6
0.0096
ONL
AACATCAAGG (
8
)
1.9
0.0019
ONL
CACATCTGTA (
5
)
1.9
0.0019
ONL
GTGGACCCCA
(
7
)
1.9
0.0019
