Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29984	5730589L02Rik	RIKEN cDNA 5730589L02 gene	7		77582
Gene Ontology	integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CGCGGCTCGG (2) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma GAGGCAGAAG (4) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture GCAGCCGTGG (2) 4.6 0.0046 P8 GC+1d culture AGGGTGCTGG (5) 2.3 0.0023 P8 GC+1d culture ACGCTCACTG 1.1 0.0011 P8 GC+1d culture AGGAAGAGAA (10) 1.1 0.0011 P8 GC+1d culture GTCTCTGAAA (6) 1.1 0.0011 P8 GC+1d culture GTGTCTGAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture ACGCTCACTG 2.3 0.0023 P8 GC+SHH+1d culture AGGGTGCTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture GCAGCCGTGG (2) 2.3 0.0023 P8 GC+SHH+1d culture ACGCTCAAAA 1.2 0.0012 P8 GC+SHH+1d culture CTGAAGGAGA (3) 1.2 0.0012 3T3 fibroblasts AACCAGGCTG (7) 3.5 0.0035 3T3 fibroblasts AGGGTGCTGG (5) 3.5 0.0035 3T3 fibroblasts GCAGCCGTGG (2) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex ACGCTCACTG 4.9 0.0049 E15 cortex AGGGTGCTGG (5) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CGCGGCTCGG (2) 13.6 0.0136 P1 cortex AGGAAGAGAA (10) 4.5 0.0045 P1 cortex AGGGTGCTGG (5) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus AGGGTGCTGG (5) 3.6 0.0036 Hypothalamus GCAGCCGTGG (2) 3.6 0.0036 Hypothalamus TGTAACACTT (2) 3.6 0.0036 Hypothalamus CGCGGCTCGG (2) 1.8 0.0018 Hypothalamus CTGAAGGAGA (3) 1.8 0.0018 Hypothalamus GCCTTGGGCC (5) 1.8 0.0018 Hypothalamus GTCTCTGAAA (6) 1.8 0.0018 Hypothalamus TAAAACACTG (3) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina AGGGTGCTGG (5) 3.8 0.0038 E12.5 retina GTCTCTGAAA (6) 1.9 0.0019 E12.5 retina TGTAACACTT (2) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina ACGCTCAAAA 3.6 0.0036 E14.5 retina GCCTTGGGCC (5) 3.6 0.0036 E14.5 retina ACGCTCACTG 1.8 0.0018 E14.5 retina GAGGCAGAAG (4) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina ACGCTCACTG 1.8 0.0018 E16.5 retina CTGAAGGAGA (3) 1.8 0.0018 E16.5 retina GCAGCCGTGG (2) 1.8 0.0018 E16.5 retina GTCTCTGAAA (6) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TAAAACACTG (3) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AGGGTGCTGG (5) 5.9 0.0059 P0.5 retina GTGTCTGAAA (3) 3.9 0.0039 P0.5 retina GTCTCTGAAA (6) 2 0.002 P0.5 retina TAAAACACTG (3) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina ACGCTCACTG 1.8 0.0018 P2.5 retina AGGGTGCTGG (5) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina ACGCTCACTG 5.9 0.0059 P4.5 retina ACGCTCAAAA 4 0.004 P4.5 retina GAGGCAGAAG (4) 4 0.004 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GCAGCCGCTG (2) 3.3 0.0033 P6.5 retina ACGCTCAAAA 1.7 0.0017 P6.5 retina AGGAAGAGAA (10) 1.7 0.0017 P6.5 retina GCAGCCGTGG (2) 1.7 0.0017 P6.5 retina GTGTCTGAAA (3) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GTCTCTGAAA (6) 3.7 0.0037 P10.5 crx- retina AACCAGGCTG (7) 1.9 0.0019 P10.5 crx- retina GCCTTGGGCC (5) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina ACGCTCACTG 9.6 0.0096 P10.5 crx+ retina GCAGCCGCTG (2) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal ACGCTCACTG 3.7 0.0037 Adult retinal ACGCTCAAAA 1.9 0.0019 Adult retinal CTGAAGGAGA (3) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AACCAGGCTG (7) 1.9 0.0019 ONL ACGCTCAAAA 1.9 0.0019 ONL CTGAAGGAGA (3) 1.9 0.0019