Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29998
Pnpla2
patatin-like phospholipase domain containing 2
7
66853
Human Homolog
PNPLA2[patatin-like phospholipase domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGTATCTTT (
3
)
40.8
0.0408
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
GTGTATCTTT (
3
)
13.9
0.0139
Cb medulloblastoma
CCAATGTCTG (
4
)
2.3
0.0023
P8 GC+1d culture
GTGTATCTTT (
3
)
29.7
0.0297
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
CCAATGTCTG (
4
)
4.6
0.0046
P8 GC+1d culture
CTGTGGAATG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGTATCTTT (
3
)
34
0.034
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
CCAATGTCTG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGTGGAATG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGCCAAAAA (
5
)
1.2
0.0012
3T3 fibroblasts
GTGTATCTTT (
3
)
10.5
0.0105
3T3 fibroblasts
CCAATGTCTG (
4
)
3.5
0.0035
E15 cortex
GTGTATCTTT (
3
)
4.9
0.0049
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
GTGTATCTTT (
3
)
13.6
0.0136
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
GTGTATCTTT (
3
)
7.2
0.0072
Hypothalamus
CCAATGTCTG (
4
)
1.8
0.0018
Hypothalamus
CTGTGGAATG
(
3
)
1.8
0.0018
E12.5 retina
GTGTATCTTT (
3
)
63.8
0.0638
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
CCAATGTCTG (
4
)
3.8
0.0038
E12.5 retina
TAGCCAAAAA (
5
)
1.9
0.0019
E14.5 retina
GTGTATCTTT (
3
)
38.3
0.0383
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E14.5 retina
GTGAAGACCA
1.8
0.0018
E16.5 retina
GTGTATCTTT (
3
)
43.5
0.0435
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E18.5 retina
GTGTATCTTT (
3
)
61.8
0.0618
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
P0.5 retina
GTGTATCTTT (
3
)
45.1
0.0451
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
CTGTGGAATG
(
3
)
2
0.002
P2.5 retina
GTGTATCTTT (
3
)
70.4
0.0704
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
GTGTATCTTT (
3
)
37.6
0.0376
P6.5 retina
GTGTATCTTT (
3
)
50
0.05
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
CTGTGGAATG
(
3
)
1.7
0.0017
P6.5 retina
TAGCCAAAAA (
5
)
1.7
0.0017
P10.5 crx- retina
GTGTATCTTT (
3
)
14.9
0.0149
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
CTGTGGAATG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTGTATCTTT (
3
)
32.7
0.0327
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
TAGCCAAAAA (
5
)
3.8
0.0038
Adult retinal
GTGTATCTTT (
3
)
14.8
0.0148
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
ONL
GTGTATCTTT (
3
)
15.3
0.0153
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
GTGAAGACCA
3.8
0.0038
