Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30038	Epb4.1	erythrocyte protein band 4.1	4	4 65.7 cM	269587
Gene Ontology	actin binding | actin cytoskeleton | actin cytoskeleton organization and biogenesis | cortical actin cytoskeleton organization and biogenesis | cytoplasm | cytoskeletal protein binding | cytoskeleton | membrane | nucleus | regulation of cell shape | spectrin binding | structural molecule activity
Human Homolog	EPB41[erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACACTTGAC (3) 6.5 0.0065 P8 Cb GC ACAAAAATGA (2) 3.3 0.0033 Cb medulloblastoma AACACTTGAC (3) 4.6 0.0046 Cb medulloblastoma ATGAAAAGAC (4) 4.6 0.0046 Cb medulloblastoma AAGACTTGAG (2) 2.3 0.0023 Cb medulloblastoma ACAAAAATGA (2) 2.3 0.0023 Cb medulloblastoma CCAGCATCAG (2) 2.3 0.0023 Cb medulloblastoma GAAGGTGGAA (4) 2.3 0.0023 Cb medulloblastoma GCTGGATTCT (4) 2.3 0.0023 P8 GC+1d culture ACAAAAATGA (2) 5.7 0.0057 P8 GC+1d culture AACACTTGAC (3) 2.3 0.0023 P8 GC+1d culture TATGGAATTG (2) 1.1 0.0011 P8 GC+1d culture TGATAAAAAA (9) 1.1 0.0011 P8 GC+SHH+1d culture ACAAAAATGA (2) 4.7 0.0047 P8 GC+SHH+1d culture AACACTTGAC (3) 3.5 0.0035 P8 GC+SHH+1d culture TATGGAATTG (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTCATTC 1.2 0.0012 P8 GC+SHH+1d culture ATGAAAAGAC (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGGTGGAAA (11) 1.2 0.0012 P1 cortex AACACTTGAC (3) 4.5 0.0045 Hypothalamus GAGGTGGAAA (11) 3.6 0.0036 Hypothalamus ACAAAAATGA (2) 1.8 0.0018 Hypothalamus ATGAAAAGAC (4) 1.8 0.0018 Hypothalamus GCTGGATTCT (4) 1.8 0.0018 E12.5 retina AACACTTGAC (3) 11.3 0.0113 E12.5 retina GAGGTGGAAA (11) 3.8 0.0038 E12.5 retina ACAAAAATGA (2) 1.9 0.0019 E12.5 retina ATGAAAAGAC (4) 1.9 0.0019 E12.5 retina GAAGGTGGAA (4) 1.9 0.0019 E12.5 retina GCTGGATTCT (4) 1.9 0.0019 E14.5 retina AACACTTGAC (3) 5.5 0.0055 E14.5 retina ACAAAAATGA (2) 3.6 0.0036 E14.5 retina ATGAAAAGAC (4) 1.8 0.0018 E14.5 retina GAGGTGGAAA (11) 1.8 0.0018 E14.5 retina GCTGGATTCT (4) 1.8 0.0018 E16.5 retina AACACTTGAC (3) 14.5 0.0145 E16.5 retina ACAAAAATGA (2) 5.4 0.0054 E16.5 retina GAGGTGGAAA (11) 3.6 0.0036 E18.5 retina AACACTTGAC (3) 5.5 0.0055 E18.5 retina ATGAAAAGAC (4) 5.5 0.0055 E18.5 retina GAGGTGGAAA (11) 1.8 0.0018 E18.5 retina TGATAAAAAA (9) 1.8 0.0018 P0.5 retina AACACTTGAC (3) 5.9 0.0059 P0.5 retina AAGCTCATTC 2 0.002 P0.5 retina GAGGTGGAAA (11) 2 0.002 P2.5 retina GAGGTGGAAA (11) 8.8 0.0088 P2.5 retina ACAAAAATGA (2) 7 0.007 P2.5 retina AACACTTGAC (3) 5.3 0.0053 P2.5 retina CCAGCATCAG (2) 1.8 0.0018 P2.5 retina GAAGGTGGAA (4) 1.8 0.0018 P2.5 retina TATGGAATTG (2) 1.8 0.0018 P4.5 retina AACACTTGAC (3) 11.9 0.0119 P4.5 retina GAGGTGGAAA (11) 5.9 0.0059 P4.5 retina ACAAAAATGA (2) 4 0.004 P4.5 retina TGATAAAAAA (9) 4 0.004 P4.5 retina ATGAAAAGAC (4) 2 0.002 P4.5 retina CCAGCATCAG (2) 2 0.002 P6.5 retina ACAAAAATGA (2) 8.3 0.0083 P6.5 retina ATGAAAAGAC (4) 1.7 0.0017 P6.5 retina GAAGGTGGAA (4) 1.7 0.0017 P6.5 retina GAGGTGGAAA (11) 1.7 0.0017 P10.5 crx- retina ACAAAAATGA (2) 22.3 0.0223 P10.5 crx- retina AACACTTGAC (3) 7.4 0.0074 P10.5 crx- retina GAGGTGGAAA (11) 3.7 0.0037 P10.5 crx+ retina ACAAAAATGA (2) 11.5 0.0115 P10.5 crx+ retina AACACTTGAC (3) 7.7 0.0077 P10.5 crx+ retina TATGGAATTG (2) 3.8 0.0038 P10.5 crx+ retina AAGCTCATTC 1.9 0.0019 P10.5 crx+ retina AGGCTTGACA (2) 1.9 0.0019 P10.5 crx+ retina TGATAAAAAA (9) 1.9 0.0019 Adult retinal ACAAAAATGA (2) 5.6 0.0056 Adult retinal CAGCTCAGGA (7) 5.6 0.0056 Adult retinal AACACTTGAC (3) 3.7 0.0037 Adult retinal AAGACTTGAG (2) 3.7 0.0037 Adult retinal AGGCTTGACA (2) 3.7 0.0037 Adult retinal AAGCTCATTC 1.9 0.0019 ONL ACAAAAATGA (2) 23 0.023 ONL AACACTTGAC (3) 3.8 0.0038 ONL ATGAAAAGAC (4) 3.8 0.0038 ONL AAGACTTGAG (2) 1.9 0.0019