Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30059	Marcks	myristoylated alanine rich protein kinase C substrate	10	10 22.0 cM	17118
Gene Ontology	actin binding | calmodulin binding | membrane
Human Homolog	MARCKS[myristoylated alanine-rich protein kinase C substrate]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 135 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGTCAAGC 89.7 0.0897 P8 Cb GC AAGTTTGCAA 19.6 0.0196 P8 Cb GC AACTCCTAAG 8.2 0.0082 P8 Cb GC GACAGGTTTC 6.5 0.0065 P8 Cb GC GGTGCCCAGT (2) 4.9 0.0049 P8 Cb GC TTAGCTGTAC 4.9 0.0049 P8 Cb GC CTGGCTTCTT (7) 3.3 0.0033 P8 Cb GC TGCTTCTGAA (2) 3.3 0.0033 P8 Cb GC CATTTTGTGA (5) 1.6 0.0016 Cb medulloblastoma TATGTCAAGC 32.4 0.0324 Cb medulloblastoma AAGTTTGCAA 4.6 0.0046 P8 GC+1d culture TATGTCAAGC 79.9 0.0799 P8 GC+1d culture AACTCCTAAG 40 0.04 P8 GC+1d culture AAGTTTGCAA 33.1 0.0331 P8 GC+1d culture GGTGCCCAGT (2) 29.7 0.0297 P8 GC+1d culture GACAGGTTTC 17.1 0.0171 P8 GC+1d culture TTAGCTGTAC 6.8 0.0068 P8 GC+1d culture CTGGCTTCTT (7) 4.6 0.0046 P8 GC+1d culture TGCTTCTGAA (2) 2.3 0.0023 P8 GC+1d culture CAAGGCCTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture TATGTCAAGC 82 0.082 P8 GC+SHH+1d culture GGTGCCCAGT (2) 32.8 0.0328 P8 GC+SHH+1d culture AAGTTTGCAA 19.9 0.0199 P8 GC+SHH+1d culture AACTCCTAAG 18.7 0.0187 P8 GC+SHH+1d culture CTGGCTTCTT (7) 9.4 0.0094 P8 GC+SHH+1d culture GACAGGTTTC 7 0.007 P8 GC+SHH+1d culture AGTGTGTGGA (3) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGCTGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTAGCTGTAC 2.3 0.0023 P8 GC+SHH+1d culture CAAGGCCTTC (2) 1.2 0.0012 3T3 fibroblasts TATGTCAAGC 168.2 0.1682 3T3 fibroblasts GGTGCCCAGT (2) 129.7 0.1297 3T3 fibroblasts AAGTTTGCAA 17.5 0.0175 3T3 fibroblasts CTGGCTTCTT (7) 17.5 0.0175 3T3 fibroblasts CAAGGCCTTC (2) 14 0.014 3T3 fibroblasts AACTCCTAAG 10.5 0.0105 3T3 fibroblasts GACAGGTTTC 7 0.007 3T3 fibroblasts GGTGGCTGCT (2) 7 0.007 3T3 fibroblasts TGCTTCTGAA (2) 7 0.007 3T3 fibroblasts CATTTTGTGA (5) 3.5 0.0035 E15 cortex TATGTCAAGC 49.5 0.0495 E15 cortex AAGTTTGCAA 34.6 0.0346 E15 cortex GGTGCCCAGT (2) 29.7 0.0297 E15 cortex AACTCCTAAG 9.9 0.0099 E15 cortex GACAGGTTTC 4.9 0.0049 E15 cortex GGTGGCTGCT (2) 4.9 0.0049 P1 cortex AACTCCTAAG 259.1 0.2591 P1 cortex TATGTCAAGC 45.5 0.0455 P1 cortex CTGGCTTCTT (7) 36.4 0.0364 P1 cortex GGTGCCCAGT (2) 22.7 0.0227 P1 cortex AAGTTTGCAA 13.6 0.0136 P1 cortex TGCTTCTGAA (2) 9.1 0.0091 Hypothalamus TATGTCAAGC 48.9 0.0489 Hypothalamus AACTCCTAAG 1.8 0.0018 Hypothalamus AAGTTTGCAA 1.8 0.0018 E12.5 retina TATGTCAAGC 105.1 0.1051 E12.5 retina AACTCCTAAG 20.7 0.0207 E12.5 retina AAGTTTGCAA 13.1 0.0131 E12.5 retina TTAGCTGTAC 5.6 0.0056 E12.5 retina CTGGCTTCTT (7) 1.9 0.0019 E12.5 retina GACAGGTTTC 1.9 0.0019 E12.5 retina GCTCTCTGCC (4) 1.9 0.0019 E12.5 retina GGTGGCTGCT (2) 1.9 0.0019 E14.5 retina TATGTCAAGC 54.7 0.0547 E14.5 retina AAGTTTGCAA 12.8 0.0128 E14.5 retina AACTCCTAAG 5.5 0.0055 E14.5 retina TTAGCTGTAC 3.6 0.0036 E14.5 retina CTGGCTTCTT (7) 1.8 0.0018 E14.5 retina TGCCTTCTGA (3) 1.8 0.0018 E14.5 retina TGCTTCTGAA (2) 1.8 0.0018 E16.5 retina TATGTCAAGC 81.5 0.0815 E16.5 retina AAGTTTGCAA 19.9 0.0199 E16.5 retina AACTCCTAAG 5.4 0.0054 E16.5 retina TGCTTCTGAA (2) 3.6 0.0036 E16.5 retina GACAGGTTTC 1.8 0.0018 E16.5 retina GCTCTCTGCC (4) 1.8 0.0018 E16.5 retina TTAGCTGTAC 1.8 0.0018 E18.5 retina TATGTCAAGC 49.1 0.0491 E18.5 retina AACTCCTAAG 9.1 0.0091 E18.5 retina GACAGGTTTC 7.3 0.0073 E18.5 retina GGTGCCCAGT (2) 7.3 0.0073 E18.5 retina AAGTTTGCAA 5.5 0.0055 E18.5 retina GGTGGCTGCT (2) 5.5 0.0055 E18.5 retina CAAGGCCTTC (2) 1.8 0.0018 E18.5 retina CTGGCTTCTT (7) 1.8 0.0018 P0.5 retina TATGTCAAGC 133.5 0.1335 P0.5 retina GGTGCCCAGT (2) 23.6 0.0236 P0.5 retina AAGTTTGCAA 15.7 0.0157 P0.5 retina CTGGCTTCTT (7) 11.8 0.0118 P0.5 retina GACAGGTTTC 9.8 0.0098 P0.5 retina AACTCCTAAG 5.9 0.0059 P0.5 retina TGCTTCTGAA (2) 3.9 0.0039 P2.5 retina TATGTCAAGC 44 0.044 P2.5 retina AACTCCTAAG 22.9 0.0229 P2.5 retina AAGTTTGCAA 17.6 0.0176 P2.5 retina GGTGCCCAGT (2) 12.3 0.0123 P2.5 retina CTGGCTTCTT (7) 7 0.007 P2.5 retina GACAGGTTTC 1.8 0.0018 P2.5 retina GGTGGCTGCT (2) 1.8 0.0018 P2.5 retina TGCCTTCTGA (3) 1.8 0.0018 P4.5 retina TATGTCAAGC 29.7 0.0297 P4.5 retina AACTCCTAAG 7.9 0.0079 P4.5 retina AAGTTTGCAA 5.9 0.0059 P4.5 retina GGTGCCCAGT (2) 5.9 0.0059 P4.5 retina CTGGCTTCTT (7) 4 0.004 P4.5 retina GACAGGTTTC 4 0.004 P4.5 retina GGTGGCTGCT (2) 2 0.002 P4.5 retina TGCTTCTGAA (2) 2 0.002 P4.5 retina TTAGCTGTAC 2 0.002 P6.5 retina TATGTCAAGC 26.7 0.0267 P6.5 retina AACTCCTAAG 11.7 0.0117 P6.5 retina AAGTTTGCAA 6.7 0.0067 P6.5 retina CTGGCTTCTT (7) 3.3 0.0033 P6.5 retina GGTGCCCAGT (2) 3.3 0.0033 P6.5 retina TGCCTTCTGA (3) 3.3 0.0033 P10.5 crx- retina TATGTCAAGC 131.9 0.1319 P10.5 crx- retina AAGTTTGCAA 5.6 0.0056 P10.5 crx- retina AACTCCTAAG 3.7 0.0037 P10.5 crx- retina GACAGGTTTC 3.7 0.0037 P10.5 crx- retina CATTTTGTGA (5) 1.9 0.0019 P10.5 crx- retina TTAGCTGTAC 1.9 0.0019 P10.5 crx+ retina TATGTCAAGC 26.9 0.0269 P10.5 crx+ retina AAGTTTGCAA 9.6 0.0096 P10.5 crx+ retina AACTCCTAAG 3.8 0.0038 P10.5 crx+ retina GACAGGTTTC 3.8 0.0038 P10.5 crx+ retina TTAGCTGTAC 1.9 0.0019 Adult retinal TATGTCAAGC 33.3 0.0333 Adult retinal CTGGCTTCTT (7) 3.7 0.0037 Adult retinal GGTGCCCAGT (2) 3.7 0.0037 Adult retinal AAGTTTGCAA 1.9 0.0019 Adult retinal GCTCTCTGCC (4) 1.9 0.0019 Adult retinal GGTGGCTGCT (2) 1.9 0.0019 Adult retinal TGCCTTCTGA (3) 1.9 0.0019 Adult retinal TGCTTCTGAA (2) 1.9 0.0019 ONL TATGTCAAGC 46 0.046