Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30085	Akr1a4	aldo-keto reductase family 1, member A4 (aldehyde reductase)	4		58810
Gene Ontology	alcohol dehydrogenase (NADP+) activity | aldehyde reductase activity | aldehyde reductase activity | biological_process unknown | cellular_component unknown | oxidoreductase activity
Human Homolog	AKR1A1[aldo-keto reductase family 1, member A1 (aldehyde reductase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTACGGTGG (2) 13.1 0.0131 P8 Cb GC AGAAAGAAAA (8) 3.3 0.0033 P8 Cb GC CATACCTGAC (4) 3.3 0.0033 P8 Cb GC CCCTTAGCGC (2) 3.3 0.0033 P8 Cb GC GCCGATCTCC (2) 3.3 0.0033 P8 Cb GC AGCTGCAGCT (2) 1.6 0.0016 P8 Cb GC GAAGAGTGAG (3) 1.6 0.0016 Cb medulloblastoma ATTACGGTGG (2) 11.6 0.0116 Cb medulloblastoma AGAAAGAAAA (8) 6.9 0.0069 Cb medulloblastoma AGCTGCAGCT (2) 4.6 0.0046 Cb medulloblastoma GCCGATCTCC (2) 4.6 0.0046 Cb medulloblastoma CATACCTGAC (4) 2.3 0.0023 Cb medulloblastoma CCCTTAGCGC (2) 2.3 0.0023 Cb medulloblastoma GAAGAGTGAG (3) 2.3 0.0023 P8 GC+1d culture ATTACGGTGG (2) 33.1 0.0331 P8 GC+1d culture GCCGATCCTC (5) 2.3 0.0023 P8 GC+1d culture TTTCCACCTC (3) 2.3 0.0023 P8 GC+1d culture CTGTACATTG (6) 1.1 0.0011 P8 GC+1d culture GAACTGCAAA (10) 1.1 0.0011 P8 GC+1d culture GAAGAGTGAG (3) 1.1 0.0011 P8 GC+1d culture GCCGATCTCC (2) 1.1 0.0011 P8 GC+1d culture TGGCTCTGGC (3) 1.1 0.0011 P8 GC+1d culture TTTTTCAGCT (2) 1.1 0.0011 P8 GC+SHH+1d culture ATTACGGTGG (2) 36.3 0.0363 P8 GC+SHH+1d culture GCCGATCCTC (5) 5.9 0.0059 P8 GC+SHH+1d culture TTTCCACCTC (3) 5.9 0.0059 P8 GC+SHH+1d culture CATACCTGAC (4) 2.3 0.0023 P8 GC+SHH+1d culture AGAAAGAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CTGTACATTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GAAGAGTGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GACTTCTTGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCTGGC (3) 1.2 0.0012 3T3 fibroblasts ATTACGGTGG (2) 42.1 0.0421 3T3 fibroblasts GCCGATCCTC (5) 7 0.007 3T3 fibroblasts TGGCTCTGGC (3) 3.5 0.0035 3T3 fibroblasts TTTCCACCTC (3) 3.5 0.0035 E15 cortex ATTACGGTGG (2) 39.6 0.0396 E15 cortex GCCGATCCTC (5) 14.8 0.0148 E15 cortex CATACCTGAC (4) 4.9 0.0049 E15 cortex CTGCACTCCC 4.9 0.0049 E15 cortex TCTGCCACTG (2) 4.9 0.0049 P1 cortex ATTACGGTGG (2) 27.3 0.0273 P1 cortex AGAAAGAAAA (8) 9.1 0.0091 P1 cortex CATACCTGAC (4) 4.5 0.0045 Hypothalamus ATTACGGTGG (2) 5.4 0.0054 Hypothalamus TGGCTCTGGC (3) 3.6 0.0036 Hypothalamus AGAAAGAAAA (8) 1.8 0.0018 Hypothalamus CATACCTGAC (4) 1.8 0.0018 Hypothalamus CCCTTAGCGC (2) 1.8 0.0018 Hypothalamus CTGTACATTG (6) 1.8 0.0018 Hypothalamus GCCGATCCTC (5) 1.8 0.0018 Hypothalamus GCCGATCTCC (2) 1.8 0.0018 Hypothalamus GGCACAATAT (3) 1.8 0.0018 Hypothalamus TCTGCCACTG (2) 1.8 0.0018 Hypothalamus TTTTTCAGCT (2) 1.8 0.0018 E12.5 retina ATTACGGTGG (2) 7.5 0.0075 E12.5 retina TTTCCACCTC (3) 5.6 0.0056 E12.5 retina AGAAAGAAAA (8) 1.9 0.0019 E12.5 retina GCCGATCCTC (5) 1.9 0.0019 E14.5 retina ATTACGGTGG (2) 10.9 0.0109 E14.5 retina CATACCTGAC (4) 3.6 0.0036 E14.5 retina CCCTTAGCGC (2) 1.8 0.0018 E14.5 retina CTGCACTCCC 1.8 0.0018 E14.5 retina GGCACAATAT (3) 1.8 0.0018 E14.5 retina TCTGCCACTG (2) 1.8 0.0018 E16.5 retina ATTACGGTGG (2) 14.5 0.0145 E16.5 retina CATACCTGAC (4) 3.6 0.0036 E16.5 retina GGCACAATAT (3) 3.6 0.0036 E16.5 retina TTTCCACCTC (3) 3.6 0.0036 E16.5 retina GCCGATCTCC (2) 1.8 0.0018 E16.5 retina TCTGCCACTG (2) 1.8 0.0018 E18.5 retina ATTACGGTGG (2) 7.3 0.0073 E18.5 retina AGAAAGAAAA (8) 5.5 0.0055 E18.5 retina CATACCTGAC (4) 1.8 0.0018 E18.5 retina GAAGCAAAAA (5) 1.8 0.0018 E18.5 retina GGCTTGTCCA (2) 1.8 0.0018 E18.5 retina TTTCCACCTC (3) 1.8 0.0018 P0.5 retina ATTACGGTGG (2) 35.3 0.0353 P0.5 retina TTTCCACCTC (3) 9.8 0.0098 P0.5 retina GCCGATCCTC (5) 3.9 0.0039 P0.5 retina AGAAAGAAAA (8) 2 0.002 P0.5 retina CATACCTGAC (4) 2 0.002 P0.5 retina GCCGATCTCC (2) 2 0.002 P2.5 retina ATTACGGTGG (2) 8.8 0.0088 P2.5 retina AGAAAGAAAA (8) 3.5 0.0035 P2.5 retina TGGCTCTGGC (3) 3.5 0.0035 P2.5 retina GCCGATCCTC (5) 1.8 0.0018 P2.5 retina GGCACAATAT (3) 1.8 0.0018 P2.5 retina TTTCCACCTC (3) 1.8 0.0018 P4.5 retina ATTACGGTGG (2) 17.8 0.0178 P4.5 retina AGAAAGAAAA (8) 5.9 0.0059 P4.5 retina GCCGATCCTC (5) 5.9 0.0059 P4.5 retina GAAGCAAAAA (5) 2 0.002 P4.5 retina GACTTCTTGC (5) 2 0.002 P6.5 retina ATTACGGTGG (2) 20 0.02 P6.5 retina AGAAAGAAAA (8) 5 0.005 P6.5 retina GACTTCTTGC (5) 3.3 0.0033 P6.5 retina GGCTTGTCCA (2) 3.3 0.0033 P6.5 retina CATACCTGAC (4) 1.7 0.0017 P6.5 retina GAACTGCAAA (10) 1.7 0.0017 P6.5 retina GCCGATCCTC (5) 1.7 0.0017 P6.5 retina TTTCCACCTC (3) 1.7 0.0017 P6.5 retina TTTTTCAGCT (2) 1.7 0.0017 P10.5 crx- retina ATTACGGTGG (2) 24.2 0.0242 P10.5 crx- retina GCCGATCCTC (5) 5.6 0.0056 P10.5 crx- retina TGGCTCTGGC (3) 3.7 0.0037 P10.5 crx- retina TCTGCCACTG (2) 1.9 0.0019 P10.5 crx+ retina ATTACGGTGG (2) 25 0.025 P10.5 crx+ retina CATACCTGAC (4) 3.8 0.0038 P10.5 crx+ retina GCCGATCCTC (5) 3.8 0.0038 P10.5 crx+ retina CCCTTAGCGC (2) 1.9 0.0019 P10.5 crx+ retina CTGCACTCCC 1.9 0.0019 P10.5 crx+ retina GAAGAGTGAG (3) 1.9 0.0019 Adult retinal ATTACGGTGG (2) 9.3 0.0093 Adult retinal GAACTGCAAA (10) 1.9 0.0019 Adult retinal TTTCCACCTC (3) 1.9 0.0019 ONL ATTACGGTGG (2) 9.6 0.0096 ONL TTTCCACCTC (3) 9.6 0.0096 ONL TGGCTCTGGC (3) 3.8 0.0038 ONL GCCGATCCTC (5) 1.9 0.0019 ONL GCCGATCTCC (2) 1.9 0.0019 ONL GGCTTGTCCA (2) 1.9 0.0019