Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30110	2410133F24Rik	RIKEN cDNA 2410133F24 gene	9		76794
Mm.30110	Man2c1	mannosidase, alpha, class 2C, member 1	9		73744
Gene Ontology	alpha-mannosidase activity | carbohydrate metabolism | endoplasmic reticulum | hydrolase activity | hydrolase activity, acting on glycosyl bonds
Human Homolog	MAN2C1[mannosidase, alpha, class 2C, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGACACCA (4) 120.7 0.1207 P8 Cb GC TGCAATAAAA (7) 4.9 0.0049 P8 Cb GC TGGACTGCTG (3) 3.3 0.0033 P8 Cb GC GATGACCCCA (5) 1.6 0.0016 P8 Cb GC GGGAAATTAA (5) 1.6 0.0016 P8 Cb GC TGACTGGCTG (2) 1.6 0.0016 Cb medulloblastoma TGCAATAAAA (7) 32.4 0.0324 Cb medulloblastoma GATGACACCA (4) 13.9 0.0139 Cb medulloblastoma GCGGCAGCGC (5) 6.9 0.0069 Cb medulloblastoma GCTGGAACTG (6) 4.6 0.0046 Cb medulloblastoma GTGGAGCTGA (6) 2.3 0.0023 P8 GC+1d culture GATGACACCA (4) 122.1 0.1221 P8 GC+1d culture TGCAATAAAA (7) 10.3 0.0103 P8 GC+1d culture GTGGAGCTGA (6) 4.6 0.0046 P8 GC+1d culture GCTGGAACTG (6) 2.3 0.0023 P8 GC+1d culture GCGGCAGCGC (5) 1.1 0.0011 P8 GC+1d culture GTGGACCCTG (6) 1.1 0.0011 P8 GC+1d culture TGGACTGCTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GATGACACCA (4) 97.2 0.0972 P8 GC+SHH+1d culture TGCAATAAAA (7) 12.9 0.0129 P8 GC+SHH+1d culture GCTGGAACTG (6) 5.9 0.0059 P8 GC+SHH+1d culture GTGGAGCTGA (6) 4.7 0.0047 P8 GC+SHH+1d culture TGGACTGCTG (3) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCAGCGC (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAATTAA (5) 1.2 0.0012 P8 GC+SHH+1d culture GGTTTGGAAA (6) 1.2 0.0012 3T3 fibroblasts GTGGAGCTGA (6) 10.5 0.0105 3T3 fibroblasts TGGACTGCTG (3) 10.5 0.0105 3T3 fibroblasts TGACTGGCTG (2) 3.5 0.0035 3T3 fibroblasts TGCAATAAAA (7) 3.5 0.0035 E15 cortex GATGACACCA (4) 24.7 0.0247 E15 cortex GCTGGAACTG (6) 4.9 0.0049 E15 cortex GTGGAGCTGA (6) 4.9 0.0049 E15 cortex TGCAATAAAA (7) 4.9 0.0049 P1 cortex GATGACACCA (4) 54.5 0.0545 P1 cortex GCGGCAGCGC (5) 9.1 0.0091 P1 cortex GCTGGAACTG (6) 9.1 0.0091 P1 cortex TGCAATAAAA (7) 9.1 0.0091 P1 cortex GATGACCCCA (5) 4.5 0.0045 P1 cortex GTGGACCCTG (6) 4.5 0.0045 P1 cortex TGGACTGCTG (3) 4.5 0.0045 Hypothalamus GATGACACCA (4) 23.5 0.0235 Hypothalamus GCGGCAGCGC (5) 18.1 0.0181 Hypothalamus TGCAATAAAA (7) 5.4 0.0054 Hypothalamus GAGCAGAACC (3) 1.8 0.0018 Hypothalamus GCTGCAATGC (3) 1.8 0.0018 Hypothalamus GCTGGAACTG (6) 1.8 0.0018 Hypothalamus GTGGACCCTG (6) 1.8 0.0018 E12.5 retina GATGACACCA (4) 193.4 0.1934 E12.5 retina GCTGGAACTG (6) 16.9 0.0169 E12.5 retina TGCAATAAAA (7) 7.5 0.0075 E12.5 retina TGGACTGCTG (3) 1.9 0.0019 E14.5 retina GATGACACCA (4) 52.8 0.0528 E14.5 retina TGCAATAAAA (7) 7.3 0.0073 E14.5 retina GCTGGAACTG (6) 5.5 0.0055 E14.5 retina GCTGCAATGC (3) 3.6 0.0036 E16.5 retina GATGACACCA (4) 76.1 0.0761 E16.5 retina GCTGGAACTG (6) 7.2 0.0072 E16.5 retina TGCAATAAAA (7) 5.4 0.0054 E18.5 retina GATGACACCA (4) 58.2 0.0582 E18.5 retina TGCAATAAAA (7) 23.6 0.0236 E18.5 retina GCTGGAACTG (6) 5.5 0.0055 E18.5 retina GGTTTGGAAA (6) 1.8 0.0018 E18.5 retina GTGGACCCTG (6) 1.8 0.0018 E18.5 retina GTGGAGCTGA (6) 1.8 0.0018 P0.5 retina GATGACACCA (4) 160.9 0.1609 P0.5 retina TGCAATAAAA (7) 17.7 0.0177 P0.5 retina TGGACTGCTG (3) 7.9 0.0079 P0.5 retina GCTGCCAAGA (7) 2 0.002 P0.5 retina GCTGGAACTG (6) 2 0.002 P0.5 retina GTGGACCCTG (6) 2 0.002 P2.5 retina GATGACACCA (4) 52.8 0.0528 P2.5 retina TGCAATAAAA (7) 14.1 0.0141 P2.5 retina GCTGGAACTG (6) 3.5 0.0035 P2.5 retina GAGCAGAACC (3) 1.8 0.0018 P2.5 retina GATGACCCCA (5) 1.8 0.0018 P2.5 retina GTGGAGCTGA (6) 1.8 0.0018 P2.5 retina TGGACTGCTG (3) 1.8 0.0018 P4.5 retina GATGACACCA (4) 67.4 0.0674 P4.5 retina TGCAATAAAA (7) 15.9 0.0159 P4.5 retina GAGCAGAACC (3) 4 0.004 P4.5 retina GCTGGAACTG (6) 4 0.004 P4.5 retina TGGACTGCTG (3) 4 0.004 P4.5 retina GCTGCCAAGA (7) 2 0.002 P6.5 retina GATGACACCA (4) 61.7 0.0617 P6.5 retina TGCAATAAAA (7) 18.3 0.0183 P6.5 retina TGGACTGCTG (3) 6.7 0.0067 P6.5 retina GCTGGAACTG (6) 5 0.005 P6.5 retina GATGACCCCA (5) 1.7 0.0017 P10.5 crx- retina GATGACACCA (4) 79.9 0.0799 P10.5 crx- retina TGCAATAAAA (7) 11.1 0.0111 P10.5 crx- retina TGGACTGCTG (3) 5.6 0.0056 P10.5 crx- retina GAGCAGAACC (3) 1.9 0.0019 P10.5 crx- retina GCGGCAGCGC (5) 1.9 0.0019 P10.5 crx- retina GCTGGAACTG (6) 1.9 0.0019 P10.5 crx- retina GGGAAATTAA (5) 1.9 0.0019 P10.5 crx+ retina GATGACACCA (4) 48.1 0.0481 P10.5 crx+ retina TGCAATAAAA (7) 19.2 0.0192 P10.5 crx+ retina GCGGCAGCGC (5) 1.9 0.0019 P10.5 crx+ retina GCTGGAACTG (6) 1.9 0.0019 P10.5 crx+ retina GGTTTGGAAA (6) 1.9 0.0019 P10.5 crx+ retina TGACTGGCTG (2) 1.9 0.0019 P10.5 crx+ retina TGGACTGCTG (3) 1.9 0.0019 Adult retinal GATGACACCA (4) 46.3 0.0463 Adult retinal TGCAATAAAA (7) 7.4 0.0074 Adult retinal GCTGGAACTG (6) 3.7 0.0037 Adult retinal GTGGACCCTG (6) 3.7 0.0037 Adult retinal TGGACTGCTG (3) 1.9 0.0019 ONL GATGACACCA (4) 28.7 0.0287 ONL TGCAATAAAA (7) 7.7 0.0077 ONL GGTTTGGAAA (6) 1.9 0.0019