Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30113	Ndufs3	NADH dehydrogenase (ubiquinone) Fe-S protein 3	11		68349
Gene Ontology	electron carrier activity | extracellular space | membrane fraction | mitochondrial electron transport, NADH to ubiquinone | mitochondrion | mitochondrion | NADH dehydrogenase (ubiquinone) activity | NADH dehydrogenase activity | oxidoreductase activity | respiratory chain complex I (sensu Eukarya)
Human Homolog	NDUFS3[NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGATCCTAG (4) 24.5 0.0245 P8 Cb GC CTTGGAGTTT (2) 11.4 0.0114 P8 Cb GC GCGGCGGTGC (6) 4.9 0.0049 P8 Cb GC TTTGGAGTTT (3) 3.3 0.0033 P8 Cb GC CTTTGGGAGT (2) 1.6 0.0016 P8 Cb GC CTTTTGAAGT (2) 1.6 0.0016 P8 Cb GC GCGGCGGCTG (6) 1.6 0.0016 P8 Cb GC TCTGTGGCAA (2) 1.6 0.0016 Cb medulloblastoma TAGATCCTAG (4) 34.7 0.0347 Cb medulloblastoma CTTTGGGAGT (2) 2.3 0.0023 Cb medulloblastoma GCGGCGGTGC (6) 2.3 0.0023 Cb medulloblastoma TTTGGAGTTT (3) 2.3 0.0023 P8 GC+1d culture TAGATCCTAG (4) 21.7 0.0217 P8 GC+1d culture CTTTGGGAGT (2) 4.6 0.0046 P8 GC+1d culture GCGGCGGTGC (6) 4.6 0.0046 P8 GC+1d culture CTTTTGAAGT (2) 1.1 0.0011 P8 GC+1d culture TCCCAGACCT (4) 1.1 0.0011 P8 GC+SHH+1d culture TAGATCCTAG (4) 24.6 0.0246 P8 GC+SHH+1d culture CTTGGAGTTT (2) 4.7 0.0047 P8 GC+SHH+1d culture CTTTGGGAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture CTTTTGAAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCGGCTG (6) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCGGTGC (6) 2.3 0.0023 P8 GC+SHH+1d culture TAAGATTTCC 1.2 0.0012 P8 GC+SHH+1d culture TCTGTGGCAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGCCTGG (7) 1.2 0.0012 3T3 fibroblasts GCGGCGGTGC (6) 17.5 0.0175 3T3 fibroblasts CTTGGAGTTT (2) 3.5 0.0035 P1 cortex TAGATCCTAG (4) 13.6 0.0136 P1 cortex CTTTGGGAGT (2) 4.5 0.0045 P1 cortex TGTGGCCTGG (7) 4.5 0.0045 Hypothalamus TAGATCCTAG (4) 38 0.038 Hypothalamus GCGGCGGTGC (6) 5.4 0.0054 Hypothalamus GCACACACTG (4) 1.8 0.0018 Hypothalamus GCGGCGGCTG (6) 1.8 0.0018 Hypothalamus TAAGATTTCC 1.8 0.0018 Hypothalamus TTTGGAGTTT (3) 1.8 0.0018 E12.5 retina TAGATCCTAG (4) 16.9 0.0169 E12.5 retina CTTGGAGTTT (2) 5.6 0.0056 E12.5 retina GCACACACTG (4) 5.6 0.0056 E12.5 retina CTTTGGGAGT (2) 1.9 0.0019 E12.5 retina TTTGGAGTTT (3) 1.9 0.0019 E14.5 retina TAGATCCTAG (4) 29.2 0.0292 E14.5 retina CTTGGAGTTT (2) 3.6 0.0036 E14.5 retina CTTTTGAAGT (2) 1.8 0.0018 E14.5 retina TAAGATTTCC 1.8 0.0018 E14.5 retina TCCCAGACCT (4) 1.8 0.0018 E16.5 retina TAGATCCTAG (4) 36.2 0.0362 E16.5 retina CTTGGAGTTT (2) 5.4 0.0054 E16.5 retina GCGGCGGCTG (6) 1.8 0.0018 E16.5 retina TCTGTGGCAA (2) 1.8 0.0018 E16.5 retina TTTGGAGTTT (3) 1.8 0.0018 E18.5 retina TAGATCCTAG (4) 21.8 0.0218 E18.5 retina GCGGCGGTGC (6) 5.5 0.0055 E18.5 retina CTTGGAGTTT (2) 3.6 0.0036 E18.5 retina CTTTGGGAGT (2) 1.8 0.0018 E18.5 retina TAAGATTTCC 1.8 0.0018 E18.5 retina TTTGGAGTTT (3) 1.8 0.0018 P0.5 retina TAGATCCTAG (4) 7.9 0.0079 P0.5 retina TCCCAGACCT (4) 5.9 0.0059 P0.5 retina CTTGGAGTTT (2) 3.9 0.0039 P0.5 retina GCGGCGGCTG (6) 3.9 0.0039 P0.5 retina GCGGCGGTGC (6) 2 0.002 P2.5 retina TAGATCCTAG (4) 31.7 0.0317 P2.5 retina CTTTGGGAGT (2) 3.5 0.0035 P4.5 retina TAGATCCTAG (4) 33.7 0.0337 P4.5 retina CTTTGGGAGT (2) 4 0.004 P4.5 retina GCGGCGGTGC (6) 4 0.004 P4.5 retina CTTGGAGTTT (2) 2 0.002 P4.5 retina GCACACACTG (4) 2 0.002 P6.5 retina TAGATCCTAG (4) 20 0.02 P6.5 retina GCGGCGGTGC (6) 6.7 0.0067 P6.5 retina CTTTGGGAGT (2) 5 0.005 P6.5 retina CTTGGAGTTT (2) 1.7 0.0017 P6.5 retina TTTGGAGTTT (3) 1.7 0.0017 P10.5 crx- retina TAGATCCTAG (4) 35.3 0.0353 P10.5 crx- retina CTTTGGGAGT (2) 5.6 0.0056 P10.5 crx- retina GCGGCGGCTG (6) 3.7 0.0037 P10.5 crx- retina GCGGCGGTGC (6) 3.7 0.0037 P10.5 crx- retina GCACACACTG (4) 1.9 0.0019 P10.5 crx- retina TCCCAGACCT (4) 1.9 0.0019 P10.5 crx- retina TTTGGAGTTT (3) 1.9 0.0019 P10.5 crx+ retina TAGATCCTAG (4) 19.2 0.0192 P10.5 crx+ retina GCGGCGGTGC (6) 9.6 0.0096 P10.5 crx+ retina CTTTGGGAGT (2) 3.8 0.0038 P10.5 crx+ retina TGTGGCCTGG (7) 3.8 0.0038 P10.5 crx+ retina TTTGGAGTTT (3) 3.8 0.0038 Adult retinal GCGGCGGTGC (6) 9.3 0.0093 Adult retinal GCGGCGGCTG (6) 3.7 0.0037 Adult retinal TAGATCCTAG (4) 3.7 0.0037 Adult retinal CTTTTGAAGT (2) 1.9 0.0019 ONL TAGATCCTAG (4) 9.6 0.0096 ONL CTTTGGGAGT (2) 5.7 0.0057 ONL GCGGCGGTGC (6) 1.9 0.0019 ONL TTTGGAGTTT (3) 1.9 0.0019