Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301147	1700054E11Rik	RIKEN cDNA 1700054E11 gene	13		73444
Mm.301147	Btf3	basic transcription factor 3	13	13 D1	218490
Gene Ontology	nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	BTF3[basic transcription factor 3] | BTF3[basic transcription factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGCTTTTT (3) 19.6 0.0196 P8 Cb GC AACCAGGAGA (2) 1.6 0.0016 P8 Cb GC AACTGCTTTT (8) 1.6 0.0016 Cb medulloblastoma ACTGCTTTTT (3) 6.9 0.0069 Cb medulloblastoma ACTGCTTCTT (3) 2.3 0.0023 Cb medulloblastoma GGAAAAGAAA (11) 2.3 0.0023 Cb medulloblastoma TTTACAAACC (4) 2.3 0.0023 P8 GC+1d culture ACTGCTTTTT (3) 26.3 0.0263 P8 GC+1d culture ACTGCTTCTT (3) 2.3 0.0023 P8 GC+1d culture GGAAAAGAAA (11) 2.3 0.0023 P8 GC+1d culture ATATAAAATA (3) 1.1 0.0011 P8 GC+1d culture TTTACAAACC (4) 1.1 0.0011 P8 GC+SHH+1d culture ACTGCTTTTT (3) 17.6 0.0176 P8 GC+SHH+1d culture ATATAAAATA (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATAAAATA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTACAAACC (4) 1.2 0.0012 3T3 fibroblasts ACTGCTTTTT (3) 17.5 0.0175 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex ACTGCTTTTT (3) 19.8 0.0198 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex ACTGCTTTTT (3) 9.1 0.0091 P1 cortex AACTGCTTTT (8) 4.5 0.0045 P1 cortex ATATAAAATA (3) 4.5 0.0045 Hypothalamus ACTGCTTTTT (3) 5.4 0.0054 Hypothalamus AAATAAAATA (4) 1.8 0.0018 E12.5 retina ACTGCTTTTT (3) 11.3 0.0113 E12.5 retina AACCAGGAGA (2) 3.8 0.0038 E12.5 retina ACTGCTTCTT (3) 1.9 0.0019 E12.5 retina GGAAAAGAAA (11) 1.9 0.0019 E14.5 retina ACTGCCTTTT (5) 3.6 0.0036 E14.5 retina AAATAAAATA (4) 1.8 0.0018 E14.5 retina ACTGCTTTTT (3) 1.8 0.0018 E16.5 retina ACTGCTTTTT (3) 16.3 0.0163 E16.5 retina TTTACAAACC (4) 3.6 0.0036 E16.5 retina AAATAAAATA (4) 1.8 0.0018 E16.5 retina AACCAGGAGA (2) 1.8 0.0018 E16.5 retina ACTGCCTTTT (5) 1.8 0.0018 E18.5 retina ACTGCTTTTT (3) 12.7 0.0127 P0.5 retina ACTGCTTTTT (3) 35.3 0.0353 P0.5 retina GGAAAAGAAA (11) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAATAAAATA (4) 2 0.002 P0.5 retina ACTGCTTCTT (3) 2 0.002 P2.5 retina ACTGCTTTTT (3) 15.8 0.0158 P2.5 retina GGAAAAGAAA (11) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ACTGCTTTTT (3) 15.9 0.0159 P4.5 retina ACTGCTTCTT (3) 5.9 0.0059 P4.5 retina ATATAAAATA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTTACAAACC (4) 2 0.002 P6.5 retina ACTGCTTTTT (3) 10 0.01 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina ACTGCTTTTT (3) 16.7 0.0167 P10.5 crx- retina AACTGCTTTT (8) 3.7 0.0037 P10.5 crx- retina ACTGCTTCTT (3) 3.7 0.0037 P10.5 crx+ retina ACTGCTTTTT (3) 9.6 0.0096 P10.5 crx+ retina AAATAAAATA (4) 1.9 0.0019 Adult retinal ACTGCTTTTT (3) 9.3 0.0093 Adult retinal AACTGCTTTT (8) 1.9 0.0019 Adult retinal ACTGCTTCTT (3) 1.9 0.0019 Adult retinal ATATAAAATA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL ACTGCTTTTT (3) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057