Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30118	Bloc1s1	biogenesis of lysosome-related organelles complex-1, subunit 1	10	10 72.0 cM	14533
Gene Ontology	biological_process unknown | cytosol | protein binding
Human Homolog	BLOC1S1[biogenesis of lysosome-related organelles complex-1, subunit 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCACCATTG (2) 19.6 0.0196 P8 Cb GC CTGTCCCGCC (3) 3.3 0.0033 P8 Cb GC AGGTGAAGAC (4) 1.6 0.0016 Cb medulloblastoma CGCACCATTG (2) 13.9 0.0139 P8 GC+1d culture CGCACCATTG (2) 25.1 0.0251 P8 GC+SHH+1d culture CGCACCATTG (2) 17.6 0.0176 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture TAGGCCTGGG 1.2 0.0012 3T3 fibroblasts CGCACCATTG (2) 49.1 0.0491 E15 cortex CGCACCATTG (2) 24.7 0.0247 E15 cortex CTGTCCCGCC (3) 4.9 0.0049 E15 cortex GACAGGAGGA (9) 4.9 0.0049 Hypothalamus CGCACCATTG (2) 9.1 0.0091 Hypothalamus TAGGCCTGGG 1.8 0.0018 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina CGCACCATTG (2) 1.9 0.0019 E14.5 retina CGCACCATTG (2) 3.6 0.0036 E14.5 retina TAGGCCTGGG 3.6 0.0036 E16.5 retina CGCACCATTG (2) 16.3 0.0163 E16.5 retina AGGTGAAGAC (4) 3.6 0.0036 E16.5 retina TAGGCCTGGG 1.8 0.0018 E18.5 retina CGCACCATTG (2) 14.6 0.0146 E18.5 retina TAGGCCTGGG 1.8 0.0018 P0.5 retina CGCACCATTG (2) 19.6 0.0196 P2.5 retina CGCACCATTG (2) 10.6 0.0106 P2.5 retina GACAGGAGGA (9) 1.8 0.0018 P4.5 retina CGCACCATTG (2) 5.9 0.0059 P4.5 retina ACTAGTGCTT (80) 2 0.002 P6.5 retina CGCACCATTG (2) 11.7 0.0117 P10.5 crx- retina CGCACCATTG (2) 33.4 0.0334 P10.5 crx+ retina CGCACCATTG (2) 17.3 0.0173 P10.5 crx+ retina TAGGCCTGGG 1.9 0.0019 Adult retinal CGCACCATTG (2) 16.7 0.0167 Adult retinal TAGGCCTGGG 1.9 0.0019 ONL CGCACCATTG (2) 1.9 0.0019 ONL GACAGGAGGA (9) 1.9 0.0019