Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.301646
D130056L21Rik
RIKEN cDNA D130056L21 gene
2
320123
Mm.301646
9130404D14Rik
RIKEN cDNA 9130404D14 gene
2
227737
Human Homolog
C9orf88[chromosome 9 open reading frame 88]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 87 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGAAATGAG (
7
)
8.2
0.0082
P8 Cb GC
AGGACAGTGC (
5
)
3.3
0.0033
P8 Cb GC
TTCTCTAGTG
(
3
)
3.3
0.0033
P8 Cb GC
ATGACAGAAG (
6
)
1.6
0.0016
Cb medulloblastoma
AGGACAGTGC (
5
)
16.2
0.0162
Cb medulloblastoma
AGGAAATGAG (
7
)
4.6
0.0046
Cb medulloblastoma
GAAGACAGAA (
6
)
2.3
0.0023
Cb medulloblastoma
GTTCTGCACA
(
5
)
2.3
0.0023
P8 GC+1d culture
TTCTCTAGTG
(
3
)
12.6
0.0126
P8 GC+1d culture
AATCTGAACG
(
2
)
4.6
0.0046
P8 GC+1d culture
AGGAAATGAG (
7
)
2.3
0.0023
P8 GC+1d culture
ATGACAGAAG (
6
)
2.3
0.0023
P8 GC+1d culture
GTTCTGCACA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TTCTCTAGTG
(
3
)
7
0.007
P8 GC+SHH+1d culture
AGGACAGTGC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
AGGAAATGAG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
AATCTGAACG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
ATGACAGAAG (
6
)
1.2
0.0012
3T3 fibroblasts
AATCTGAACG
(
2
)
10.5
0.0105
E15 cortex
AGGAAATGAG (
7
)
14.8
0.0148
E15 cortex
ATGACAGAAG (
6
)
4.9
0.0049
E15 cortex
GGCCAGGAAA (
4
)
4.9
0.0049
E15 cortex
TGGGAGGGCC (
3
)
4.9
0.0049
P1 cortex
AATCTGAACG
(
2
)
4.5
0.0045
P1 cortex
AGGAAATGAG (
7
)
4.5
0.0045
P1 cortex
ATGACAGAAG (
6
)
4.5
0.0045
Hypothalamus
AGGACAGTGC (
5
)
9.1
0.0091
Hypothalamus
AATCTGAACG
(
2
)
1.8
0.0018
Hypothalamus
GAAGACAGAA (
6
)
1.8
0.0018
E12.5 retina
AGGACAGTGC (
5
)
5.6
0.0056
E12.5 retina
AGGAAATGAG (
7
)
1.9
0.0019
E12.5 retina
GGCCAGGAAA (
4
)
1.9
0.0019
E14.5 retina
AGGAAATGAG (
7
)
5.5
0.0055
E14.5 retina
AGGACAGTGC (
5
)
5.5
0.0055
E14.5 retina
ATGACAGAAG (
6
)
3.6
0.0036
E14.5 retina
GGCCAGGAAA (
4
)
1.8
0.0018
E14.5 retina
TGGGAGGGCC (
3
)
1.8
0.0018
E14.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
E16.5 retina
AGGACAGTGC (
5
)
10.9
0.0109
E16.5 retina
AGGAAATGAG (
7
)
3.6
0.0036
E16.5 retina
ATGACAGAAG (
6
)
1.8
0.0018
E16.5 retina
GGCCAGGAAA (
4
)
1.8
0.0018
E18.5 retina
AGGAAATGAG (
7
)
3.6
0.0036
E18.5 retina
AGGACAGTGC (
5
)
3.6
0.0036
E18.5 retina
GGCCAGGAAA (
4
)
1.8
0.0018
E18.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
P0.5 retina
AAAGCAGTGG
(
3
)
2
0.002
P0.5 retina
AGGAAATGAG (
7
)
2
0.002
P0.5 retina
AGGACAGTGC (
5
)
2
0.002
P0.5 retina
ATGACAGAAG (
6
)
2
0.002
P2.5 retina
AGGAAATGAG (
7
)
3.5
0.0035
P2.5 retina
ATGACAGAAG (
6
)
1.8
0.0018
P2.5 retina
GAAGACAGAA (
6
)
1.8
0.0018
P2.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
P4.5 retina
AGGAAATGAG (
7
)
4
0.004
P4.5 retina
AGGACAGTGC (
5
)
4
0.004
P4.5 retina
GAAGACAGAA (
6
)
2
0.002
P4.5 retina
GTTCTGCACA
(
5
)
2
0.002
P6.5 retina
AGGAAATGAG (
7
)
8.3
0.0083
P6.5 retina
AGGACAGTGC (
5
)
8.3
0.0083
P6.5 retina
ATGACAGAAG (
6
)
5
0.005
P6.5 retina
GAAGACAGAA (
6
)
1.7
0.0017
P6.5 retina
GCTGGGGTTG (
5
)
1.7
0.0017
P6.5 retina
TGGGAGGGCC (
3
)
1.7
0.0017
P6.5 retina
TTCTCTAGTG
(
3
)
1.7
0.0017
P10.5 crx- retina
AGGAAATGAG (
7
)
7.4
0.0074
P10.5 crx- retina
AGGACAGTGC (
5
)
5.6
0.0056
P10.5 crx- retina
AAAGCAGTGG
(
3
)
3.7
0.0037
P10.5 crx- retina
ATGACAGAAG (
6
)
3.7
0.0037
P10.5 crx- retina
AATCTGAACG
(
2
)
1.9
0.0019
P10.5 crx- retina
GTTCTGCACA
(
5
)
1.9
0.0019
P10.5 crx- retina
TTCTCTAGTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGGGGTTG (
5
)
5.8
0.0058
P10.5 crx+ retina
AATCTGAACG
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGGAAATGAG (
7
)
3.8
0.0038
P10.5 crx+ retina
AGGACAGTGC (
5
)
1.9
0.0019
P10.5 crx+ retina
ATGACAGAAG (
6
)
1.9
0.0019
P10.5 crx+ retina
GTTCTGCACA
(
5
)
1.9
0.0019
P10.5 crx+ retina
TTCTCTAGTG
(
3
)
1.9
0.0019
Adult retinal
AGGAAATGAG (
7
)
3.7
0.0037
Adult retinal
AGGACAGTGC (
5
)
1.9
0.0019
Adult retinal
TTCTCTAGTG
(
3
)
1.9
0.0019
ONL
AGGACAGTGC (
5
)
5.7
0.0057
ONL
AGGAAATGAG (
7
)
3.8
0.0038
ONL
ATGACAGAAG (
6
)
1.9
0.0019
ONL
GAAGACAGAA (
6
)
1.9
0.0019
ONL
GCTGGGGTTG (
5
)
1.9
0.0019
