Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301655	Pmpcb	peptidase (mitochondrial processing) beta	5		73078
Gene Ontology	hydrolase activity | metalloendopeptidase activity | metallopeptidase activity | mitochondrion | proteolysis and peptidolysis
Human Homolog	PMPCB[peptidase (mitochondrial processing) beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AAAAAATAAA (17) 11.4 0.0114 P8 Cb GC CGTTGGATTC 8.2 0.0082 P8 Cb GC GCGACAGCCT (3) 3.3 0.0033 P8 Cb GC GCCTTCAAGG (3) 1.6 0.0016 P8 Cb GC TTGGTTTTCA (5) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CGTTGGATTC 9.2 0.0092 Cb medulloblastoma AAAAAATAAA (17) 6.9 0.0069 Cb medulloblastoma GCCTTCAAGG (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture AAAAAATAAA (17) 8 0.008 P8 GC+1d culture TGACTACAAA (4) 2.3 0.0023 P8 GC+1d culture CGTTGGATTC 1.1 0.0011 P8 GC+1d culture GCGACAGCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CGTTGGATTC 5.9 0.0059 P8 GC+SHH+1d culture AAAAAATAAA (17) 2.3 0.0023 P8 GC+SHH+1d culture CTGCTGCAGC (7) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CGTTGGATTC 10.5 0.0105 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex CGTTGGATTC 9.9 0.0099 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex CGTTGGATTC 9.1 0.0091 P1 cortex GCCTTCAAGG (3) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus AAAAAATAAA (17) 9.1 0.0091 Hypothalamus TTGGTTTTCA (5) 5.4 0.0054 Hypothalamus CGTTGGATTC 1.8 0.0018 Hypothalamus TGACTACAAA (4) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAAAAATAAA (17) 9.4 0.0094 E12.5 retina CGTTGGATTC 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina CGTTGGATTC 9.1 0.0091 E14.5 retina AAAAAATAAA (17) 5.5 0.0055 E14.5 retina CTGCTGCAGC (7) 1.8 0.0018 E14.5 retina GCGACAGCCT (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina AAAAAATAAA (17) 9.1 0.0091 E16.5 retina CGTTGGATTC 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina AAAAAATAAA (17) 16.4 0.0164 E18.5 retina CGTTGGATTC 3.6 0.0036 E18.5 retina GCGACAGCCT (3) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CGTTGGATTC 9.8 0.0098 P0.5 retina AAAAAATAAA (17) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina AAAAAATAAA (17) 12.3 0.0123 P2.5 retina CGTTGGATTC 8.8 0.0088 P2.5 retina CTGCTGCAGC (7) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina AAAAAATAAA (17) 11.9 0.0119 P4.5 retina CGTTGGATTC 2 0.002 P4.5 retina CTGCTGCAGC (7) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAAAAATAAA (17) 10 0.01 P6.5 retina CGTTGGATTC 5 0.005 P6.5 retina GCCTTCAAGG (3) 3.3 0.0033 P6.5 retina TGACTACAAA (4) 1.7 0.0017 P6.5 retina TTGGTTTTCA (5) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina CGTTGGATTC 18.6 0.0186 P10.5 crx- retina AAAAAATAAA (17) 5.6 0.0056 P10.5 crx- retina TGACTACAAA (4) 3.7 0.0037 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina CGTTGGATTC 9.6 0.0096 P10.5 crx+ retina TGACTACAAA (4) 5.8 0.0058 P10.5 crx+ retina TTGGTTTTCA (5) 3.8 0.0038 P10.5 crx+ retina AAAAAATAAA (17) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CGTTGGATTC 5.6 0.0056 Adult retinal GCCTTCAAGG (3) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAAAAATAAA (17) 23 0.023 ONL CGTTGGATTC 7.7 0.0077