Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30184	Pfdn1	prefoldin 1	18		67199
Gene Ontology	cell cycle | chaperone activity | protein folding | transcription factor activity
Human Homolog	PFDN1[prefoldin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTTAGAC 22.8 0.0228 P8 Cb GC TGGGTTTAGA (5) 16.3 0.0163 P8 Cb GC TCGAAGGTGT (6) 3.3 0.0033 Cb medulloblastoma TGGGTTAGAC 23.1 0.0231 Cb medulloblastoma TGGGTTTAGA (5) 16.2 0.0162 P8 GC+1d culture TGGGTTAGAC 22.8 0.0228 P8 GC+1d culture TGGGTTTAGA (5) 9.1 0.0091 P8 GC+SHH+1d culture TGGGTTTAGA (5) 21.1 0.0211 P8 GC+SHH+1d culture TGGGTTAGAC 16.4 0.0164 P8 GC+SHH+1d culture TACCAAATGC (2) 2.3 0.0023 3T3 fibroblasts TGGGTTAGAC 7 0.007 3T3 fibroblasts TACGAAGGTG 3.5 0.0035 E15 cortex TACGAAGGTG 9.9 0.0099 E15 cortex TGGGTTTAGA (5) 4.9 0.0049 Hypothalamus TGGGTTTAGA (5) 38 0.038 Hypothalamus TGGGTTAGAC 23.5 0.0235 Hypothalamus TACCAAATGC (2) 1.8 0.0018 Hypothalamus TACGAAGGTG 1.8 0.0018 E12.5 retina TGGGTTTAGA (5) 35.7 0.0357 E12.5 retina TGGGTTAGAC 22.5 0.0225 E12.5 retina TACCAAATGC (2) 1.9 0.0019 E14.5 retina TGGGTTTAGA (5) 54.7 0.0547 E14.5 retina TGGGTTAGAC 23.7 0.0237 E16.5 retina TGGGTTTAGA (5) 54.3 0.0543 E16.5 retina TGGGTTAGAC 27.2 0.0272 E18.5 retina TGGGTTTAGA (5) 83.7 0.0837 E18.5 retina TGGGTTAGAC 52.8 0.0528 P0.5 retina TGGGTTTAGA (5) 25.5 0.0255 P0.5 retina TGGGTTAGAC 19.6 0.0196 P2.5 retina TGGGTTTAGA (5) 63.4 0.0634 P2.5 retina TGGGTTAGAC 24.6 0.0246 P2.5 retina TCGAAGGTGT (6) 1.8 0.0018 P4.5 retina TGGGTTTAGA (5) 45.6 0.0456 P4.5 retina TGGGTTAGAC 37.6 0.0376 P4.5 retina TACCAAATGC (2) 2 0.002 P4.5 retina TACGAAGGTG 2 0.002 P4.5 retina TCGAAGGTGT (6) 2 0.002 P6.5 retina TGGGTTTAGA (5) 36.7 0.0367 P6.5 retina TGGGTTAGAC 16.7 0.0167 P6.5 retina TCGAAGGTGT (6) 1.7 0.0017 P10.5 crx- retina TGGGTTAGAC 24.2 0.0242 P10.5 crx- retina TGGGTTTAGA (5) 9.3 0.0093 P10.5 crx+ retina TGGGTTTAGA (5) 25 0.025 P10.5 crx+ retina TGGGTTAGAC 15.4 0.0154 P10.5 crx+ retina TACCAAATGC (2) 1.9 0.0019 Adult retinal TGGGTTTAGA (5) 24.1 0.0241 Adult retinal TGGGTTAGAC 9.3 0.0093 ONL TGGGTTTAGA (5) 11.5 0.0115 ONL TGGGTTAGAC 5.7 0.0057