Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30219	Nkd1	naked cuticle 1 homolog (Drosophila)	8	8 C3	93960
Gene Ontology	calcium ion binding
Human Homolog	NKD1[naked cuticle homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 20 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAACACAGA (3) 8.2 0.0082 P8 Cb GC CACTGCAAGT 6.5 0.0065 P8 Cb GC GGGCGGGAGC 4.9 0.0049 Cb medulloblastoma AAGGCTGGCT (2) 2.3 0.0023 Cb medulloblastoma CACTGCAAGT 2.3 0.0023 P8 GC+1d culture GAAACACAGA (3) 26.3 0.0263 P8 GC+1d culture AAGGCTGGCT (2) 1.1 0.0011 P8 GC+1d culture CACAGTGTGG (2) 1.1 0.0011 P8 GC+1d culture GGGCGGGAGC 1.1 0.0011 P8 GC+1d culture TCTCTGTATC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAACACAGA (3) 12.9 0.0129 P8 GC+SHH+1d culture CACTGCAAGT 3.5 0.0035 P8 GC+SHH+1d culture TCTCTGTATC (2) 3.5 0.0035 P8 GC+SHH+1d culture GCAAAGGACA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGCGGGAGC 1.2 0.0012 3T3 fibroblasts GCAAAGGACA (4) 14 0.014 Hypothalamus GAAACACAGA (3) 7.2 0.0072 E12.5 retina GAAACACAGA (3) 18.8 0.0188 E12.5 retina CACTGCAAGT 1.9 0.0019 E14.5 retina GAAACACAGA (3) 12.8 0.0128 E14.5 retina AAGGCTGGCT (2) 1.8 0.0018 E14.5 retina CACTGCAAGT 1.8 0.0018 E14.5 retina TCTCTGTATC (2) 1.8 0.0018 E16.5 retina GAAACACAGA (3) 9.1 0.0091 E16.5 retina GATGGATGCT (3) 1.8 0.0018 E16.5 retina TCTCTGTATC (2) 1.8 0.0018 E18.5 retina GAAACACAGA (3) 12.7 0.0127 E18.5 retina TCTCTGTATC (2) 3.6 0.0036 E18.5 retina GATGGATGCT (3) 1.8 0.0018 E18.5 retina GGGCGGGAGC 1.8 0.0018 P0.5 retina CACTGCAAGT 3.9 0.0039 P0.5 retina GGGCGGGAGC 3.9 0.0039 P0.5 retina GAAACACAGA (3) 2 0.002 P2.5 retina GAAACACAGA (3) 8.8 0.0088 P2.5 retina GATGGATGCT (3) 3.5 0.0035 P2.5 retina AAGGCTGGCT (2) 1.8 0.0018 P4.5 retina GAAACACAGA (3) 9.9 0.0099 P6.5 retina GAAACACAGA (3) 5 0.005 P6.5 retina CACTGCAAGT 3.3 0.0033 P6.5 retina GATGGATGCT (3) 1.7 0.0017 P10.5 crx- retina GAAACACAGA (3) 5.6 0.0056 P10.5 crx- retina CACTGCAAGT 1.9 0.0019 P10.5 crx- retina TCTCTGTATC (2) 1.9 0.0019 P10.5 crx+ retina GAAACACAGA (3) 9.6 0.0096 P10.5 crx+ retina AAGGCTGGCT (2) 1.9 0.0019 P10.5 crx+ retina CACAGTGTGG (2) 1.9 0.0019 P10.5 crx+ retina GATGGATGCT (3) 1.9 0.0019 Adult retinal CACTGCAAGT 1.9 0.0019