Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.302613
Podxl2
podocalyxin-like 2
6
319655
Human Homolog
PODXL2[podocalyxin-like 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCAGCAAAC
(
6
)
14.7
0.0147
Cb medulloblastoma
GGCAGCAAAC
(
6
)
9.2
0.0092
Cb medulloblastoma
GAAGACCCAG (
4
)
2.3
0.0023
P8 GC+1d culture
GGCAGCAAAC
(
6
)
20.5
0.0205
P8 GC+1d culture
CCTGTGAGGG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCAGCAAAC
(
6
)
9.4
0.0094
P8 GC+SHH+1d culture
CCTGTGAGGG (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAGACCCAG (
4
)
2.3
0.0023
3T3 fibroblasts
CCTGTGAGGG (
4
)
7
0.007
E15 cortex
GGCAGCAAAC
(
6
)
89.1
0.0891
P1 cortex
GGCAGCAAAC
(
6
)
22.7
0.0227
Hypothalamus
GGCAGCAAAC
(
6
)
9.1
0.0091
Hypothalamus
GAAGACCCAG (
4
)
1.8
0.0018
E12.5 retina
GGCAGCAAAC
(
6
)
3.8
0.0038
E14.5 retina
GAAGACCCAG (
4
)
1.8
0.0018
E16.5 retina
GGCAGCAAAC
(
6
)
5.4
0.0054
P0.5 retina
GGCAGCAAAC
(
6
)
7.9
0.0079
P0.5 retina
GAAGACCCAG (
4
)
2
0.002
P2.5 retina
GGCAGCAAAC
(
6
)
10.6
0.0106
P4.5 retina
GGCAGCAAAC
(
6
)
13.9
0.0139
P6.5 retina
GGCAGCAAAC
(
6
)
25
0.025
P10.5 crx- retina
GGCAGCAAAC
(
6
)
33.4
0.0334
P10.5 crx- retina
GAAGACCCAG (
4
)
1.9
0.0019
P10.5 crx+ retina
GGCAGCAAAC
(
6
)
17.3
0.0173
P10.5 crx+ retina
GAAGACCCAG (
4
)
1.9
0.0019
Adult retinal
GGCAGCAAAC
(
6
)
18.5
0.0185
ONL
GAAGACCCAG (
4
)
1.9
0.0019
