Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.302831
E430026H10Rik
RIKEN cDNA E430026H10 gene
6
320241
Mm.302831
D130059P03Rik
RIKEN cDNA D130059P03 gene
6
6 B1
320538
Human Homolog
FLJ25778[hypothetical protein FLJ25778]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 9 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 78 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGCTCTCCA
(
4
)
1.6
0.0016
P8 Cb GC
GCGGCTGCGG
(
4
)
1.6
0.0016
P8 Cb GC
TTAACCAACT
(
3
)
1.6
0.0016
Cb medulloblastoma
AGGCTCTCCA
(
4
)
9.2
0.0092
Cb medulloblastoma
GGTCTCTTTA
(
2
)
4.6
0.0046
P8 GC+1d culture
AAATACATTT (
4
)
3.4
0.0034
P8 GC+1d culture
TTAACCAACT
(
3
)
3.4
0.0034
P8 GC+1d culture
AGGCTCTCCA
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGACGGAGG (
6
)
2.3
0.0023
P8 GC+1d culture
GCGGCTGCGG
(
4
)
2.3
0.0023
P8 GC+1d culture
ACATAGAATT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AGGCTCTCCA
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGACGGAGG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GCGGCTGCGG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAATACATTT (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTCTCTTTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTAACCAACT
(
3
)
1.2
0.0012
3T3 fibroblasts
GCGGCTGCGG
(
4
)
3.5
0.0035
E15 cortex
GAGACGGAGG (
6
)
9.9
0.0099
P1 cortex
TTAACCAACT
(
3
)
4.5
0.0045
Hypothalamus
AGGCTCTCCA
(
4
)
10.9
0.0109
Hypothalamus
AAATACATTT (
4
)
1.8
0.0018
Hypothalamus
CAACTGAGGA (
4
)
1.8
0.0018
Hypothalamus
GAGACGGAGG (
6
)
1.8
0.0018
E12.5 retina
AGGCTCTCCA
(
4
)
5.6
0.0056
E14.5 retina
AAATACATTT (
4
)
5.5
0.0055
E14.5 retina
AGGCTCTCCA
(
4
)
5.5
0.0055
E14.5 retina
ACATAGAATT (
3
)
1.8
0.0018
E14.5 retina
CAACTGAGGA (
4
)
1.8
0.0018
E16.5 retina
AGGCTCTCCA
(
4
)
12.7
0.0127
E16.5 retina
TTAACCAACT
(
3
)
5.4
0.0054
E16.5 retina
AAATACATTT (
4
)
1.8
0.0018
E16.5 retina
ACATAGAATT (
3
)
1.8
0.0018
E16.5 retina
ATTACGCCAA (
233
)
1.8
0.0018
E18.5 retina
AGGCTCTCCA
(
4
)
20
0.02
E18.5 retina
AAATACATTT (
4
)
1.8
0.0018
E18.5 retina
AACTGTTTCA
(
2
)
1.8
0.0018
E18.5 retina
GAGACGGAGG (
6
)
1.8
0.0018
E18.5 retina
GGCCATCATA
(
2
)
1.8
0.0018
E18.5 retina
TTAACCAACT
(
3
)
1.8
0.0018
P0.5 retina
AGGCTCTCCA
(
4
)
11.8
0.0118
P0.5 retina
GAGACGGAGG (
6
)
7.9
0.0079
P0.5 retina
ATTACGCCAA (
233
)
2
0.002
P2.5 retina
AGGCTCTCCA
(
4
)
24.6
0.0246
P2.5 retina
TTAACCAACT
(
3
)
7
0.007
P2.5 retina
AAATACATTT (
4
)
1.8
0.0018
P2.5 retina
GAGACGGAGG (
6
)
1.8
0.0018
P2.5 retina
GCGGCTGCGG
(
4
)
1.8
0.0018
P2.5 retina
GGTCTCTTTA
(
2
)
1.8
0.0018
P4.5 retina
AGGCTCTCCA
(
4
)
25.8
0.0258
P4.5 retina
TTAACCAACT
(
3
)
13.9
0.0139
P4.5 retina
AAATACATTT (
4
)
4
0.004
P4.5 retina
GAGACGGAGG (
6
)
2
0.002
P4.5 retina
GGCCATCATA
(
2
)
2
0.002
P6.5 retina
AGGCTCTCCA
(
4
)
28.3
0.0283
P6.5 retina
TTAACCAACT
(
3
)
5
0.005
P6.5 retina
AAATACATTT (
4
)
3.3
0.0033
P6.5 retina
CAACTGAGGA (
4
)
1.7
0.0017
P6.5 retina
GAGACGGAGG (
6
)
1.7
0.0017
P6.5 retina
GGTCTCTTTA
(
2
)
1.7
0.0017
P10.5 crx- retina
AGGCTCTCCA
(
4
)
3.7
0.0037
P10.5 crx- retina
GGTCTCTTTA
(
2
)
3.7
0.0037
P10.5 crx- retina
TTAACCAACT
(
3
)
3.7
0.0037
P10.5 crx- retina
AAATACATTT (
4
)
1.9
0.0019
P10.5 crx- retina
GACAGAAACA
(
5
)
1.9
0.0019
P10.5 crx+ retina
AGGCTCTCCA
(
4
)
9.6
0.0096
P10.5 crx+ retina
AAATACATTT (
4
)
3.8
0.0038
P10.5 crx+ retina
GACAGAAACA
(
5
)
1.9
0.0019
P10.5 crx+ retina
GGCCATCATA
(
2
)
1.9
0.0019
Adult retinal
AGGCTCTCCA
(
4
)
5.6
0.0056
Adult retinal
ATTACGCCAA (
233
)
3.7
0.0037
Adult retinal
GAGACGGAGG (
6
)
3.7
0.0037
Adult retinal
AACTGTTTCA
(
2
)
1.9
0.0019
Adult retinal
CAACTGAGGA (
4
)
1.9
0.0019
Adult retinal
TTAACCAACT
(
3
)
1.9
0.0019
ONL
AACTGTTTCA
(
2
)
1.9
0.0019
ONL
GACAGAAACA
(
5
)
1.9
0.0019
ONL
GCGGCTGCGG
(
4
)
1.9
0.0019
