Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.302865	Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	9	9 31.0 cM	13070
Gene Ontology	C21-steroid hormone biosynthesis | cholesterol metabolism | electron transport | membrane | mitochondrion | monooxygenase activity | oxidoreductase activity
Human Homolog	CYP11A1[cytochrome P450, family 11, subfamily A, polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCTGCAGT (4) 8.2 0.0082 P8 Cb GC AAAATGGAGA (8) 1.6 0.0016 P8 Cb GC CAAATCCCCC (2) 1.6 0.0016 P8 Cb GC CCTGGAAGAA (3) 1.6 0.0016 P8 Cb GC TTGAGGGTGG (3) 1.6 0.0016 Cb medulloblastoma ACCCTGCAGT (4) 9.2 0.0092 Cb medulloblastoma AAAATGGAGA (8) 2.3 0.0023 Cb medulloblastoma TTGAGGGTGG (3) 2.3 0.0023 P8 GC+1d culture ACCCTGCAGT (4) 5.7 0.0057 P8 GC+1d culture TTGAGGGTGG (3) 3.4 0.0034 P8 GC+1d culture CAAATCCCCC (2) 2.3 0.0023 P8 GC+1d culture AGACCTGACA (4) 1.1 0.0011 P8 GC+1d culture GGGATGCTGG (7) 1.1 0.0011 P8 GC+1d culture TACCCACCTA (5) 1.1 0.0011 P8 GC+SHH+1d culture ACCCTGCAGT (4) 10.5 0.0105 P8 GC+SHH+1d culture TTGAGGGTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture CAAATCCCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTGGAAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGATGCTGG (7) 1.2 0.0012 3T3 fibroblasts ACCCTGCAGT (4) 28 0.028 E15 cortex ACCCTGCAGT (4) 4.9 0.0049 E15 cortex CAAATCCCCC (2) 4.9 0.0049 E15 cortex GGGATGCTGG (7) 4.9 0.0049 P1 cortex ACCCTGCAGT (4) 4.5 0.0045 Hypothalamus ACCCTGCAGT (4) 3.6 0.0036 Hypothalamus GGGATGCTGG (7) 1.8 0.0018 Hypothalamus TTGAGGGTGG (3) 1.8 0.0018 E12.5 retina ACCCTGCAGT (4) 3.8 0.0038 E12.5 retina TTGAGGGTGG (3) 3.8 0.0038 E12.5 retina TACCCACCTA (5) 1.9 0.0019 E14.5 retina CAAATCCCCC (2) 3.6 0.0036 E14.5 retina AAAATGGAGA (8) 1.8 0.0018 E14.5 retina ACCCTGCAGT (4) 1.8 0.0018 E14.5 retina TTGAGGGTGG (3) 1.8 0.0018 E16.5 retina CAAATCCCCC (2) 5.4 0.0054 E16.5 retina ACCCTGCAGT (4) 3.6 0.0036 E16.5 retina TTGAGGGTGG (3) 3.6 0.0036 E16.5 retina CCTGGAAGAA (3) 1.8 0.0018 E18.5 retina TTGAGGGTGG (3) 3.6 0.0036 E18.5 retina ACCCTGCAGT (4) 1.8 0.0018 P0.5 retina ACCCTGCAGT (4) 5.9 0.0059 P0.5 retina CAAATCCCCC (2) 5.9 0.0059 P0.5 retina AAAATGGAGA (8) 3.9 0.0039 P0.5 retina CCTGGAAGAA (3) 2 0.002 P0.5 retina GGGATGCTGG (7) 2 0.002 P0.5 retina TTGAGGGTGG (3) 2 0.002 P2.5 retina ACCCTGCAGT (4) 5.3 0.0053 P2.5 retina CAAATCCCCC (2) 5.3 0.0053 P2.5 retina TTGAGGGTGG (3) 5.3 0.0053 P2.5 retina TACCCACCTA (5) 1.8 0.0018 P4.5 retina CAAATCCCCC (2) 17.8 0.0178 P4.5 retina ACCCTGCAGT (4) 4 0.004 P4.5 retina TTGAGGGTGG (3) 2 0.002 P6.5 retina ACCCTGCAGT (4) 3.3 0.0033 P6.5 retina AGACCTGACA (4) 1.7 0.0017 P6.5 retina CAAATCCCCC (2) 1.7 0.0017 P6.5 retina TTGAGGGTGG (3) 1.7 0.0017 P10.5 crx- retina CAAATCCCCC (2) 7.4 0.0074 P10.5 crx- retina AAAATGGAGA (8) 5.6 0.0056 P10.5 crx- retina ACCCTGCAGT (4) 5.6 0.0056 P10.5 crx- retina CCTGGAAGAA (3) 1.9 0.0019 P10.5 crx- retina GGGATGCTGG (7) 1.9 0.0019 P10.5 crx+ retina ACCCTGCAGT (4) 5.8 0.0058 P10.5 crx+ retina TTGAGGGTGG (3) 3.8 0.0038 P10.5 crx+ retina CAAATCCCCC (2) 1.9 0.0019 Adult retinal ACCCTGCAGT (4) 5.6 0.0056 Adult retinal CAAATCCCCC (2) 5.6 0.0056 Adult retinal GGGATGCTGG (7) 1.9 0.0019 ONL AGACCTGACA (4) 1.9 0.0019 ONL CAAATCCCCC (2) 1.9 0.0019 ONL GGGATGCTGG (7) 1.9 0.0019