Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.303059	AI663987	expressed sequence AI663987	3		94232
Gene Ontology	biological_process unknown | cytosol | endoplasmic reticulum | endoplasmic reticulum membrane | molecular_function unknown | nucleus
Human Homolog	C1orf6[chromosome 1 open reading frame 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTGAACA (4) 13.1 0.0131 P8 Cb GC CCTTCCCTTC (3) 1.6 0.0016 P8 Cb GC GAGAAATCAA (2) 1.6 0.0016 P8 Cb GC GCCTGTCTTC (2) 1.6 0.0016 P8 Cb GC TCACTGCTGT (3) 1.6 0.0016 Cb medulloblastoma TCACTGCTGT (3) 13.9 0.0139 Cb medulloblastoma TTTTTGAACA (4) 11.6 0.0116 Cb medulloblastoma CCTTCCCTTC (3) 4.6 0.0046 Cb medulloblastoma GCCTGTCTTC (2) 4.6 0.0046 P8 GC+1d culture TTTTTGAACA (4) 18.3 0.0183 P8 GC+1d culture CCTTCCCTTC (3) 10.3 0.0103 P8 GC+1d culture GCCTGTCTTC (2) 4.6 0.0046 P8 GC+1d culture AAATCTATTG 2.3 0.0023 P8 GC+1d culture TCACTGCTGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTGAACA (4) 14.1 0.0141 P8 GC+SHH+1d culture CCTTCCCTTC (3) 5.9 0.0059 P8 GC+SHH+1d culture TCACTGCTGT (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATCTATTG 1.2 0.0012 P8 GC+SHH+1d culture CAGGCCCTGC (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGTCTTC (2) 1.2 0.0012 3T3 fibroblasts GCCTGTCTTC (2) 14 0.014 3T3 fibroblasts TTTTTGAACA (4) 3.5 0.0035 E15 cortex CCTTCCCTTC (3) 4.9 0.0049 E15 cortex TCACTGCTGT (3) 4.9 0.0049 P1 cortex TTTTTGAACA (4) 9.1 0.0091 Hypothalamus TTTTTGAACA (4) 12.7 0.0127 Hypothalamus TCACTGCTGT (3) 5.4 0.0054 Hypothalamus CCTTCCCTTC (3) 3.6 0.0036 Hypothalamus GCCTGTCTTC (2) 1.8 0.0018 E12.5 retina TTTTTGAACA (4) 26.3 0.0263 E12.5 retina CCTTCCCTTC (3) 3.8 0.0038 E12.5 retina GAGAAATCAA (2) 3.8 0.0038 E12.5 retina GCCTGTCTTC (2) 3.8 0.0038 E12.5 retina TCACTGCTGT (3) 3.8 0.0038 E14.5 retina TTTTTGAACA (4) 21.9 0.0219 E14.5 retina CCTTCCCTTC (3) 3.6 0.0036 E14.5 retina GAGAAATCAA (2) 1.8 0.0018 E14.5 retina GCCCCAAGCC (5) 1.8 0.0018 E14.5 retina GCCTGTCTTC (2) 1.8 0.0018 E16.5 retina TTTTTGAACA (4) 9.1 0.0091 E16.5 retina GCCTGTCTTC (2) 3.6 0.0036 E16.5 retina CCTTCCCTTC (3) 1.8 0.0018 E16.5 retina GCCCCAAGCC (5) 1.8 0.0018 E18.5 retina TTTTTGAACA (4) 14.6 0.0146 E18.5 retina CCTTCCCTTC (3) 3.6 0.0036 P0.5 retina TTTTTGAACA (4) 23.6 0.0236 P0.5 retina GCCTGTCTTC (2) 3.9 0.0039 P0.5 retina CCTTCCCTTC (3) 2 0.002 P0.5 retina GCCCCAAGCC (5) 2 0.002 P2.5 retina TTTTTGAACA (4) 19.4 0.0194 P2.5 retina CCTTCCCTTC (3) 12.3 0.0123 P4.5 retina TTTTTGAACA (4) 7.9 0.0079 P4.5 retina CCTTCCCTTC (3) 5.9 0.0059 P4.5 retina CAGGCCCTGC (5) 2 0.002 P4.5 retina GCCTGTCTTC (2) 2 0.002 P6.5 retina TTTTTGAACA (4) 11.7 0.0117 P6.5 retina TCACTGCTGT (3) 5 0.005 P6.5 retina GCCTGTCTTC (2) 3.3 0.0033 P6.5 retina CAGGCCCTGC (5) 1.7 0.0017 P6.5 retina CCTTCCCTTC (3) 1.7 0.0017 P10.5 crx- retina TTTTTGAACA (4) 16.7 0.0167 P10.5 crx- retina GCCTGTCTTC (2) 5.6 0.0056 P10.5 crx- retina CCTTCCCTTC (3) 3.7 0.0037 P10.5 crx- retina TCACTGCTGT (3) 1.9 0.0019 P10.5 crx+ retina GCCTGTCTTC (2) 9.6 0.0096 P10.5 crx+ retina TTTTTGAACA (4) 9.6 0.0096 P10.5 crx+ retina CCTTCCCTTC (3) 7.7 0.0077 P10.5 crx+ retina TCACTGCTGT (3) 1.9 0.0019 Adult retinal TTTTTGAACA (4) 5.6 0.0056 Adult retinal CCTTCCCTTC (3) 1.9 0.0019 Adult retinal GCCTGTCTTC (2) 1.9 0.0019 ONL GCCTGTCTTC (2) 3.8 0.0038 ONL TTTTTGAACA (4) 3.8 0.0038 ONL AAATCTATTG 1.9 0.0019