Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3057	Reln	reelin	5	5 8.0 cM	19699
Gene Ontology	brain development | cell adhesion | cell migration | cellular morphogenesis during differentiation | central nervous system development | development | establishment of synaptic specificity at neuromuscular junction | extracellular matrix | extracellular space | extracellular space | glial cell differentiation | hydrolase activity | locomotory behavior | neuronal migration | protein binding | serine-type endopeptidase activity | structural molecule activity
Human Homolog	RELN[reelin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTAAAATG (3) 8.2 0.0082 P8 Cb GC CTTAAATAAA (5) 6.5 0.0065 P8 Cb GC GTTCAGCCTA (3) 1.6 0.0016 Cb medulloblastoma CTTAAATAAA (5) 6.9 0.0069 P8 GC+1d culture CTTAAATAAA (5) 28.5 0.0285 P8 GC+1d culture AAGAATCCAA (3) 3.4 0.0034 P8 GC+1d culture CTGGACACCT (2) 2.3 0.0023 P8 GC+1d culture GTTCAGCCTA (3) 2.3 0.0023 P8 GC+1d culture TATTAAAATG (3) 2.3 0.0023 P8 GC+SHH+1d culture CTTAAATAAA (5) 34 0.034 P8 GC+SHH+1d culture TATTAAAATG (3) 3.5 0.0035 P8 GC+SHH+1d culture GTTCAGCCTA (3) 2.3 0.0023 P1 cortex CTGGACACCT (2) 4.5 0.0045 P1 cortex TATTAAAATG (3) 4.5 0.0045 Hypothalamus GAAATGAAGG (8) 1.8 0.0018 E12.5 retina CTGGACACCT (2) 3.8 0.0038 E12.5 retina AAGAATCCAA (3) 1.9 0.0019 E12.5 retina CTTAAATAAA (5) 1.9 0.0019 E12.5 retina TGGAGGCCAG (5) 1.9 0.0019 E14.5 retina TATTAAAATG (3) 10.9 0.0109 E14.5 retina CTGGACACCT (2) 1.8 0.0018 E14.5 retina CTTAAATAAA (5) 1.8 0.0018 E14.5 retina GTTCAGCCTA (3) 1.8 0.0018 E16.5 retina CTTAAATAAA (5) 7.2 0.0072 E16.5 retina GAAATGAAGG (8) 1.8 0.0018 E18.5 retina TATTAAAATG (3) 9.1 0.0091 E18.5 retina CTTAAATAAA (5) 5.5 0.0055 P0.5 retina CTTAAATAAA (5) 3.9 0.0039 P0.5 retina GTTCAGCCTA (3) 2 0.002 P2.5 retina CTTAAATAAA (5) 8.8 0.0088 P2.5 retina CTGGACACCT (2) 1.8 0.0018 P2.5 retina GAAATGAAGG (8) 1.8 0.0018 P2.5 retina TATTAAAATG (3) 1.8 0.0018 P4.5 retina CTTAAATAAA (5) 7.9 0.0079 P4.5 retina TATTAAAATG (3) 4 0.004 P4.5 retina CTGGACACCT (2) 2 0.002 P4.5 retina GTTCAGCCTA (3) 2 0.002 P4.5 retina TGGAGGCCAG (5) 2 0.002 P6.5 retina CTTAAATAAA (5) 6.7 0.0067 P6.5 retina CTGGACACCT (2) 3.3 0.0033 P6.5 retina TATTAAAATG (3) 3.3 0.0033 P6.5 retina GTTCAGCCTA (3) 1.7 0.0017 P10.5 crx- retina TATTAAAATG (3) 11.1 0.0111 P10.5 crx- retina CTTAAATAAA (5) 5.6 0.0056 P10.5 crx- retina CTGGACACCT (2) 1.9 0.0019 P10.5 crx- retina GAAATGAAGG (8) 1.9 0.0019 P10.5 crx+ retina CTTAAATAAA (5) 7.7 0.0077 P10.5 crx+ retina CTGGACACCT (2) 3.8 0.0038 Adult retinal TGGAGGCCAG (5) 3.7 0.0037 Adult retinal CTTAAATAAA (5) 1.9 0.0019 ONL CTGGACACCT (2) 3.8 0.0038 ONL CTTAAATAAA (5) 3.8 0.0038 ONL TGGAGGCCAG (5) 3.8 0.0038