Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.305994
Rnf8
ring finger protein 8
17
58230
Mm.305994
4930563A19Rik
RIKEN cDNA 4930563A19 gene
17
78204
Mm.305994
LOC445272
mKIAA0646 protein
17
445272
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCACTAGCTG (
4
)
9.8
0.0098
P8 Cb GC
ATGTCATTTT
(
3
)
4.9
0.0049
Cb medulloblastoma
GCACTAGCTG (
4
)
9.2
0.0092
Cb medulloblastoma
ATGTCATTTC
(
7
)
2.3
0.0023
P8 GC+1d culture
GCACTAGCTG (
4
)
20.5
0.0205
P8 GC+1d culture
ATGTCATTTC
(
7
)
4.6
0.0046
P8 GC+1d culture
ATGTCATTTT
(
3
)
1.1
0.0011
P8 GC+1d culture
TTTGTTTTGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCACTAGCTG (
4
)
8.2
0.0082
P8 GC+SHH+1d culture
ATGTCATTTC
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
ATGTCATTTT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGGCCCTGC
(
5
)
1.2
0.0012
3T3 fibroblasts
GCACTAGCTG (
4
)
28
0.028
E15 cortex
GCACTAGCTG (
4
)
14.8
0.0148
P1 cortex
GCACTAGCTG (
4
)
22.7
0.0227
Hypothalamus
GCACTAGCTG (
4
)
12.7
0.0127
E12.5 retina
GCACTAGCTG (
4
)
7.5
0.0075
E12.5 retina
ATGTCATTTC
(
7
)
5.6
0.0056
E14.5 retina
GCACTAGCTG (
4
)
7.3
0.0073
E14.5 retina
ATGTCATTTC
(
7
)
1.8
0.0018
E14.5 retina
TTTGTTTTGG
(
3
)
1.8
0.0018
E16.5 retina
ATGTCATTTC
(
7
)
5.4
0.0054
E16.5 retina
ATGTCATTTT
(
3
)
1.8
0.0018
E16.5 retina
GCACTAGCTG (
4
)
1.8
0.0018
E18.5 retina
GCACTAGCTG (
4
)
3.6
0.0036
P0.5 retina
GCACTAGCTG (
4
)
15.7
0.0157
P0.5 retina
ATGTCATTTT
(
3
)
5.9
0.0059
P0.5 retina
ATGTCATTTC
(
7
)
3.9
0.0039
P0.5 retina
TTTGTTTTGG
(
3
)
2
0.002
P2.5 retina
GCACTAGCTG (
4
)
7
0.007
P2.5 retina
ATGTCATTTC
(
7
)
5.3
0.0053
P2.5 retina
TTTGTTTTGG
(
3
)
1.8
0.0018
P4.5 retina
GCACTAGCTG (
4
)
9.9
0.0099
P4.5 retina
ATGTCATTTC
(
7
)
2
0.002
P4.5 retina
CAGGCCCTGC
(
5
)
2
0.002
P6.5 retina
GCACTAGCTG (
4
)
20
0.02
P6.5 retina
CAGGCCCTGC
(
5
)
1.7
0.0017
P10.5 crx- retina
GCACTAGCTG (
4
)
24.2
0.0242
P10.5 crx- retina
ACAGTCTGTT
(
6
)
5.6
0.0056
P10.5 crx- retina
ATGTCATTTC
(
7
)
1.9
0.0019
P10.5 crx+ retina
GCACTAGCTG (
4
)
26.9
0.0269
P10.5 crx+ retina
ATGTCATTTT
(
3
)
3.8
0.0038
P10.5 crx+ retina
ATGTCATTTC
(
7
)
1.9
0.0019
Adult retinal
GCACTAGCTG (
4
)
27.8
0.0278
Adult retinal
ATGTCATTTC
(
7
)
3.7
0.0037
Adult retinal
TTTGTTTTGG
(
3
)
1.9
0.0019
ONL
GCACTAGCTG (
4
)
5.7
0.0057
ONL
ATGTCATTTC
(
7
)
1.9
0.0019
ONL
ATGTCATTTT
(
3
)
1.9
0.0019
ONL
TTTGTTTTGG
(
3
)
1.9
0.0019
