Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.306163
Prkar1b
protein kinase, cAMP dependent regulatory, type I beta
5
5 82.0 cM
19085
Mm.306163
Prkar1b-rs
protein kinase, cAMP dependent regulatory, type I beta, related sequence
2
2 50.2 cM
19086
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCGGGCTGG
(
5
)
3.3
0.0033
P8 Cb GC
GCCAGGGCCA (
7
)
3.3
0.0033
P8 Cb GC
GCATCCACCA (
3
)
1.6
0.0016
Cb medulloblastoma
AACTATTAAA
(
5
)
9.2
0.0092
Cb medulloblastoma
GCCAGGGCCA (
7
)
9.2
0.0092
Cb medulloblastoma
ACCGGGCTGG
(
5
)
2.3
0.0023
P8 GC+1d culture
GCCAGGGCCA (
7
)
8
0.008
P8 GC+1d culture
ACCGGGCTGG
(
5
)
3.4
0.0034
P8 GC+1d culture
AACTATTAAA
(
5
)
1.1
0.0011
P8 GC+1d culture
TGGCCCTGTG
(
10
)
1.1
0.0011
P8 GC+SHH+1d culture
ACCGGGCTGG
(
5
)
4.7
0.0047
P8 GC+SHH+1d culture
GCCAGGGCCA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAGACACT (
4
)
1.2
0.0012
3T3 fibroblasts
ACCGGGCTGG
(
5
)
17.5
0.0175
3T3 fibroblasts
GCCAGGGCCA (
7
)
3.5
0.0035
E15 cortex
ACCGGGCTGG
(
5
)
9.9
0.0099
E15 cortex
GCCAGGGCCA (
7
)
4.9
0.0049
P1 cortex
AACTATTAAA
(
5
)
13.6
0.0136
P1 cortex
ACCGGGCTGG
(
5
)
4.5
0.0045
P1 cortex
GCCAGGGCCA (
7
)
4.5
0.0045
P1 cortex
TTTTCCTGTC
(
2
)
4.5
0.0045
Hypothalamus
AACTATTAAA
(
5
)
30.8
0.0308
Hypothalamus
GCCAGGGCCA (
7
)
5.4
0.0054
Hypothalamus
GGAAGACACT (
4
)
1.8
0.0018
E12.5 retina
AACTATTAAA
(
5
)
1.9
0.0019
E12.5 retina
ACCGGGCTGG
(
5
)
1.9
0.0019
E14.5 retina
GCCAGGGCCA (
7
)
7.3
0.0073
E14.5 retina
AACTATTAAA
(
5
)
1.8
0.0018
E14.5 retina
ACCGGGCTGG
(
5
)
1.8
0.0018
E16.5 retina
GCCAGGGCCA (
7
)
5.4
0.0054
E16.5 retina
AACTATTAAA
(
5
)
3.6
0.0036
E16.5 retina
TGGCCCTGTG
(
10
)
1.8
0.0018
E18.5 retina
AACTATTAAA
(
5
)
5.5
0.0055
E18.5 retina
GCCAGGGCCA (
7
)
3.6
0.0036
P0.5 retina
GCCAGGGCCA (
7
)
5.9
0.0059
P0.5 retina
ACCGGGCTGG
(
5
)
3.9
0.0039
P0.5 retina
GGAAGACACT (
4
)
2
0.002
P0.5 retina
TGGCCCTGTG
(
10
)
2
0.002
P2.5 retina
GCCAGGGCCA (
7
)
7
0.007
P2.5 retina
AACTATTAAA
(
5
)
5.3
0.0053
P2.5 retina
TTTTCCTGTC
(
2
)
1.8
0.0018
P4.5 retina
AACTATTAAA
(
5
)
5.9
0.0059
P4.5 retina
GCCAGGGCCA (
7
)
2
0.002
P4.5 retina
GGAAGACACT (
4
)
2
0.002
P6.5 retina
AACTATTAAA
(
5
)
8.3
0.0083
P6.5 retina
GCCAGGGCCA (
7
)
1.7
0.0017
P6.5 retina
GGAAGACACT (
4
)
1.7
0.0017
P10.5 crx- retina
GCCAGGGCCA (
7
)
9.3
0.0093
P10.5 crx- retina
AACTATTAAA
(
5
)
3.7
0.0037
P10.5 crx- retina
ACCGGGCTGG
(
5
)
1.9
0.0019
P10.5 crx- retina
TGGCCCTGTG
(
10
)
1.9
0.0019
P10.5 crx+ retina
AACTATTAAA
(
5
)
5.8
0.0058
P10.5 crx+ retina
GCCAGGGCCA (
7
)
5.8
0.0058
P10.5 crx+ retina
ACCGGGCTGG
(
5
)
1.9
0.0019
P10.5 crx+ retina
TTTCCTGTCA
(
3
)
1.9
0.0019
Adult retinal
AACTATTAAA
(
5
)
5.6
0.0056
Adult retinal
ACCGGGCTGG
(
5
)
3.7
0.0037
Adult retinal
GCCAGGGCCA (
7
)
1.9
0.0019
ONL
GCCAGGGCCA (
7
)
5.7
0.0057
ONL
TTTTCCTGTC
(
2
)
3.8
0.0038
ONL
TTTCCTGTCA
(
3
)
1.9
0.0019
