Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.307455	1700012F10Rik	RIKEN cDNA 1700012F10 gene	11		71833
Gene Ontology	cytoplasm | signal transduction
Human Homolog	HAN11[WD-repeat protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TATAGATTGA 11.4 0.0114 P8 Cb GC TTATCATCTC (2) 3.3 0.0033 P8 Cb GC GGAGGGAAGG (9) 1.6 0.0016 P8 Cb GC GGCAAATGGA (4) 1.6 0.0016 P8 Cb GC TGGGTTTTCT (5) 1.6 0.0016 P8 Cb GC TTCAAGTTTT (4) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TATAGATATG 6.9 0.0069 Cb medulloblastoma TATAGATTGA 6.9 0.0069 Cb medulloblastoma TTCAAGTTTT (4) 4.6 0.0046 Cb medulloblastoma GGAGGGAATG (3) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TATAGATTGA 6.8 0.0068 P8 GC+1d culture TTATCATCTC (2) 4.6 0.0046 P8 GC+1d culture GATTGCTGGC 1.1 0.0011 P8 GC+1d culture TATAGATATG 1.1 0.0011 P8 GC+1d culture TCTGTCTGTC (15) 1.1 0.0011 P8 GC+1d culture TGGGTTTTCT (5) 1.1 0.0011 P8 GC+1d culture TGTATGACCT (2) 1.1 0.0011 P8 GC+1d culture TTCAAGTTTT (4) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TATAGATTGA 15.2 0.0152 P8 GC+SHH+1d culture TTATCATCTC (2) 4.7 0.0047 P8 GC+SHH+1d culture GGCAAATGGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TATAGATATG 1.2 0.0012 P8 GC+SHH+1d culture TGGGTTTTCT (5) 1.2 0.0012 P8 GC+SHH+1d culture TTCAAGTTTT (4) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TGTATGACCT (2) 3.5 0.0035 3T3 fibroblasts TTCAAGTTTT (4) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TATAGATTGA 9.1 0.0091 P1 cortex TTCAAGTTTT (4) 4.5 0.0045 P1 cortex TTCTAACAAA (2) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TATAGATTGA 16.3 0.0163 Hypothalamus TATAGATATG 7.2 0.0072 Hypothalamus TGGGTTTTCT (5) 1.8 0.0018 Hypothalamus TTCAAGTTTT (4) 1.8 0.0018 Hypothalamus TTCTAACAAA (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTCAAGTTTT (4) 11.3 0.0113 E12.5 retina TATAGATTGA 5.6 0.0056 E12.5 retina TATAGATATG 1.9 0.0019 E12.5 retina TGGGTTTTCT (5) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTCAAGTTTT (4) 25.5 0.0255 E14.5 retina TATAGATTGA 7.3 0.0073 E14.5 retina TATAGATATG 3.6 0.0036 E14.5 retina TGGGTTTTCT (5) 3.6 0.0036 E14.5 retina GGCAAATGGA (4) 1.8 0.0018 E14.5 retina TTCTAACAAA (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTCAAGTTTT (4) 18.1 0.0181 E16.5 retina TATAGATTGA 5.4 0.0054 E16.5 retina TATAGATATG 1.8 0.0018 E16.5 retina TGGGTTTTCT (5) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTCAAGTTTT (4) 38.2 0.0382 E18.5 retina TATAGATTGA 30.9 0.0309 E18.5 retina TTCTAACAAA (2) 3.6 0.0036 E18.5 retina TATAGATATG 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTCAAGTTTT (4) 21.6 0.0216 P0.5 retina TATAGATTGA 11.8 0.0118 P0.5 retina GGCAAATGGA (4) 3.9 0.0039 P0.5 retina GGAGGGAAGG (9) 2 0.002 P0.5 retina TCTGTCTGTC (15) 2 0.002 P0.5 retina TTATCATCTC (2) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TATAGATTGA 21.1 0.0211 P2.5 retina TTCAAGTTTT (4) 14.1 0.0141 P2.5 retina TGGGTTTTCT (5) 3.5 0.0035 P2.5 retina GGAGGGAAGG (9) 1.8 0.0018 P2.5 retina GGAGGGAATG (3) 1.8 0.0018 P2.5 retina GGCAAATGGA (4) 1.8 0.0018 P2.5 retina TCTGTCTGTC (15) 1.8 0.0018 P2.5 retina TTATCATCTC (2) 1.8 0.0018 P2.5 retina TTCTAACAAA (2) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTCAAGTTTT (4) 15.9 0.0159 P4.5 retina TATAGATTGA 7.9 0.0079 P4.5 retina TTATCATCTC (2) 2 0.002 P4.5 retina TTCTAACAAA (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TATAGATTGA 15 0.015 P6.5 retina TATAGATATG 3.3 0.0033 P6.5 retina TTATCATCTC (2) 3.3 0.0033 P6.5 retina GGCAAATGGA (4) 1.7 0.0017 P6.5 retina TCTGTCTGTC (15) 1.7 0.0017 P6.5 retina TGGGTTTTCT (5) 1.7 0.0017 P6.5 retina TTCAAGTTTT (4) 1.7 0.0017 P10.5 crx- retina TATAGATTGA 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TGGGTTTTCT (5) 3.7 0.0037 P10.5 crx- retina TTATCATCTC (2) 3.7 0.0037 P10.5 crx- retina GGAGGGAATG (3) 1.9 0.0019 P10.5 crx- retina TTCAAGTTTT (4) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GGAGGGAATG (3) 9.6 0.0096 P10.5 crx+ retina TATAGATTGA 9.6 0.0096 P10.5 crx+ retina TTATCATCTC (2) 3.8 0.0038 P10.5 crx+ retina GATTGCTGGC 1.9 0.0019 P10.5 crx+ retina TATAGATATG 1.9 0.0019 P10.5 crx+ retina TCTGTCTGTC (15) 1.9 0.0019 P10.5 crx+ retina TGTATGACCT (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GGAGGGAATG (3) 3.7 0.0037 Adult retinal TGGGTTTTCT (5) 3.7 0.0037 Adult retinal TTCAAGTTTT (4) 3.7 0.0037 Adult retinal GATTGCTGGC 1.9 0.0019 Adult retinal GGAGGGAAGG (9) 1.9 0.0019 Adult retinal TATAGATATG 1.9 0.0019 Adult retinal TATAGATTGA 1.9 0.0019 Adult retinal TCTGTCTGTC (15) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TATAGATTGA 9.6 0.0096 ONL TATAGATATG 3.8 0.0038 ONL TGGGTTTTCT (5) 3.8 0.0038 ONL GATTGCTGGC 1.9 0.0019 ONL GGAGGGAAGG (9) 1.9 0.0019 ONL GGCAAATGGA (4) 1.9 0.0019