Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.307615
Lrrc2
leucine rich repeat containing 2
9
9 70.4 cM
74249
Human Homolog
LRRC2[leucine rich repeat containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
AGCTAATTTC (
4
)
8.2
0.0082
P8 Cb GC
TATCGCTGGT
(
2
)
3.3
0.0033
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
AGCTAATTTC (
4
)
13.9
0.0139
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
AGCTAATTTC (
4
)
4.6
0.0046
P8 GC+1d culture
AAAATTTTGG
(
4
)
1.1
0.0011
P8 GC+1d culture
TATCGCTGGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
AGCTAATTTC (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TATCGCTGGT
(
2
)
3.5
0.0035
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
AGCTAATTTC (
4
)
14.8
0.0148
E15 cortex
TATCGCTGGT
(
2
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
AGCTAATTTC (
4
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
AGCTAATTTC (
4
)
3.6
0.0036
Hypothalamus
TATCGCTGGT
(
2
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AGCTAATTTC (
4
)
5.6
0.0056
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
AGCTAATTTC (
4
)
1.8
0.0018
E14.5 retina
TATCGCTGGT
(
2
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TATCGCTGGT
(
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
AGCTAATTTC (
4
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
AGCTAATTTC (
4
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
AGCTAATTTC (
4
)
5.3
0.0053
P2.5 retina
TATCGCTGGT
(
2
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
AGCTAATTTC (
4
)
5
0.005
P6.5 retina
TATCGCTGGT
(
2
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
AGCTAATTTC (
4
)
1.9
0.0019
P10.5 crx- retina
TATCGCTGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
AGCTAATTTC (
4
)
1.9
0.0019
P10.5 crx+ retina
TATCGCTGGT
(
2
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
AGCTAATTTC (
4
)
3.7
0.0037
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AAAATTTTGG
(
4
)
3.8
0.0038
ONL
AGCTAATTTC (
4
)
1.9
0.0019
