Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.309498
BC060615
cDNA sequence BC060615
11
268515
Human Homolog
KIAA1447[KIAA1447 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GCTTCCCTTT (
7
)
3.3
0.0033
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CATTTGTCAG (
5
)
2.3
0.0023
Cb medulloblastoma
GCTTCCCTTT (
7
)
2.3
0.0023
Cb medulloblastoma
GGGCTGGCTC (
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAGGGGAAAG (
8
)
8
0.008
P8 GC+1d culture
GGGCTGGCTC (
5
)
4.6
0.0046
P8 GC+1d culture
GCTTCCCTTT (
7
)
3.4
0.0034
P8 GC+1d culture
AGGCAGGCAG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAGGGGAAAG (
8
)
5.9
0.0059
P8 GC+SHH+1d culture
GGGCTGGCTC (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGGCAGGCAG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAACATTCT (
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGGCTGGCTC (
5
)
14
0.014
3T3 fibroblasts
AAGGGGAAAG (
8
)
10.5
0.0105
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGGCTGGCTC (
5
)
14.8
0.0148
E15 cortex
AAGGGGAAAG (
8
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AAGGGGAAAG (
8
)
9.1
0.0091
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GGGCTGGCTC (
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GCTTCCCTTT (
7
)
5.6
0.0056
E12.5 retina
AAGGGGAAAG (
8
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AAGGGGAAAG (
8
)
1.8
0.0018
E14.5 retina
GGGCTGGCTC (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AGGCAGGCAG (
4
)
1.8
0.0018
E16.5 retina
CAGGCCCAGA
(
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AAGGGGAAAG (
8
)
3.6
0.0036
E18.5 retina
GCTTCCCTTT (
7
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AAGGGGAAAG (
8
)
7.9
0.0079
P0.5 retina
GGGCTGGCTC (
5
)
5.9
0.0059
P0.5 retina
AGAACATTCT (
2
)
2
0.002
P0.5 retina
CAGGCCCAGA
(
3
)
2
0.002
P0.5 retina
GCTTCCCTTT (
7
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AGGCAGGCAG (
4
)
1.8
0.0018
P2.5 retina
GCTTCCCTTT (
7
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GCTTCCCTTT (
7
)
4
0.004
P4.5 retina
GGGCTGGCTC (
5
)
4
0.004
P4.5 retina
AAGGGGAAAG (
8
)
2
0.002
P4.5 retina
CAGGCCCAGA
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAGGGGAAAG (
8
)
5
0.005
P6.5 retina
GGGCTGGCTC (
5
)
3.3
0.0033
P6.5 retina
GCTTCCCTTT (
7
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AGAACATTCT (
2
)
1.9
0.0019
P10.5 crx- retina
GCTTCCCTTT (
7
)
1.9
0.0019
P10.5 crx- retina
GGGCTGGCTC (
5
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CATTTGTCAG (
5
)
3.8
0.0038
P10.5 crx+ retina
GCTTCCCTTT (
7
)
3.8
0.0038
P10.5 crx+ retina
CAGGCCCAGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGGCTGGCTC (
5
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAGGGGAAAG (
8
)
5.6
0.0056
Adult retinal
GGGCTGGCTC (
5
)
5.6
0.0056
Adult retinal
GCTTCCCTTT (
7
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GCTTCCCTTT (
7
)
5.7
0.0057
ONL
AAGGGGAAAG (
8
)
3.8
0.0038
