Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.309774
1700012B15Rik
RIKEN cDNA 1700012B15 gene
12
74173
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TATTTATTTA
(
5
)
3.3
0.0033
P8 Cb GC
ATTTTGCATA
1.6
0.0016
P8 Cb GC
CCTGTGATCC (
14
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TATTTATTTA
(
5
)
6.9
0.0069
Cb medulloblastoma
ATTTTGCATA
2.3
0.0023
Cb medulloblastoma
CCTGTGATCC (
14
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TATTTATTTA
(
5
)
3.4
0.0034
P8 GC+1d culture
CCTGTGATCC (
14
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
CCTGTGATCC (
14
)
4.7
0.0047
P8 GC+SHH+1d culture
TATTTATTAT (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTTATTTA
(
5
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TATTTATTTA
(
5
)
13.6
0.0136
P1 cortex
CCTGTGATCC (
14
)
9.1
0.0091
P1 cortex
TATTTATTAT (
8
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCTGTGATCC (
14
)
3.6
0.0036
Hypothalamus
TATTTATTAT (
8
)
1.8
0.0018
Hypothalamus
TATTTATTTA
(
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CCTGTGATCC (
14
)
7.5
0.0075
E12.5 retina
GGCTCAGGAA (
7
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TATTTATTTA
(
5
)
9.1
0.0091
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CCTGTGATCC (
14
)
7.2
0.0072
E16.5 retina
TATTTATTTA
(
5
)
3.6
0.0036
E16.5 retina
GGCTCAGGAA (
7
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GGCTCAGGAA (
7
)
1.8
0.0018
E18.5 retina
TATTTATTTA
(
5
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CCTGTGATCC (
14
)
3.9
0.0039
P0.5 retina
TATTTATTTA
(
5
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCTGTGATCC (
14
)
5.3
0.0053
P2.5 retina
GGCTCAGGAA (
7
)
3.5
0.0035
P2.5 retina
TATTTATTAT (
8
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCTGTGATCC (
14
)
4
0.004
P4.5 retina
GGCTCAGGAA (
7
)
4
0.004
P4.5 retina
TATTTATTTA
(
5
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GGCTCAGGAA (
7
)
3.3
0.0033
P6.5 retina
TATTTATTAT (
8
)
3.3
0.0033
P6.5 retina
CCTGTGATCC (
14
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TATTTATTTA
(
5
)
7.4
0.0074
P10.5 crx- retina
CCTGTGATCC (
14
)
3.7
0.0037
P10.5 crx- retina
ATTTTGCATA
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CCTGTGATCC (
14
)
9.6
0.0096
P10.5 crx+ retina
ATTTTGCATA
1.9
0.0019
P10.5 crx+ retina
TATTTATTTA
(
5
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTGTGATCC (
14
)
14.8
0.0148
Adult retinal
ATTTTGCATA
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TATTTATTTA
(
5
)
1.9
0.0019
