Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.31051	Hnrpr	heterogeneous nuclear ribonucleoprotein R	4		74326
Mm.31051	D130023J23Rik	RIKEN cDNA D130023J23 gene	4		319769
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAGATTTCA (2) 26.1 0.0261 P8 Cb GC CTACCGTTGA (2) 1.6 0.0016 P8 Cb GC CTAGAAGCAG (5) 1.6 0.0016 P8 Cb GC GCCCCAGACT (5) 1.6 0.0016 Cb medulloblastoma TAAGATTTCA (2) 20.8 0.0208 Cb medulloblastoma GCCCCAGACT (5) 4.6 0.0046 P8 GC+1d culture TAAGATTTCA (2) 18.3 0.0183 P8 GC+1d culture ATTTAACAGT (2) 3.4 0.0034 P8 GC+1d culture ATTTTGCAGA (2) 1.1 0.0011 P8 GC+1d culture CTAGAAGCAG (5) 1.1 0.0011 P8 GC+1d culture TGGCCCTGTG (10) 1.1 0.0011 P8 GC+SHH+1d culture TAAGATTTCA (2) 29.3 0.0293 P8 GC+SHH+1d culture CTAGAAGCAG (5) 7 0.007 P8 GC+SHH+1d culture GCCCCAGACT (5) 4.7 0.0047 P8 GC+SHH+1d culture AATTCTGGAT (6) 2.3 0.0023 P8 GC+SHH+1d culture GCAAAGGTAA (4) 2.3 0.0023 E15 cortex TAAGATTTCA (2) 14.8 0.0148 E15 cortex GCCCCAGACT (5) 9.9 0.0099 P1 cortex TAAGATTTCA (2) 27.3 0.0273 P1 cortex CTAGAAGCAG (5) 18.2 0.0182 Hypothalamus TAAGATTTCA (2) 12.7 0.0127 Hypothalamus GCCCCAGACT (5) 1.8 0.0018 E12.5 retina TAAGATTTCA (2) 28.2 0.0282 E12.5 retina ATTTAACAGT (2) 3.8 0.0038 E12.5 retina GCAAAGGTAA (4) 3.8 0.0038 E12.5 retina AATTCTGGAT (6) 1.9 0.0019 E12.5 retina ATTTTGCAGA (2) 1.9 0.0019 E12.5 retina CTAGAAGCAG (5) 1.9 0.0019 E14.5 retina TAAGATTTCA (2) 41.9 0.0419 E14.5 retina ATTTAACAGT (2) 1.8 0.0018 E14.5 retina CTAGAAGCAG (5) 1.8 0.0018 E16.5 retina TAAGATTTCA (2) 25.4 0.0254 E16.5 retina ATTTAACAGT (2) 3.6 0.0036 E16.5 retina ATTTTGCAGA (2) 1.8 0.0018 E16.5 retina GCCCCAGACT (5) 1.8 0.0018 E16.5 retina TGGCCCTGTG (10) 1.8 0.0018 E18.5 retina TAAGATTTCA (2) 54.6 0.0546 P0.5 retina TAAGATTTCA (2) 17.7 0.0177 P0.5 retina ATTTAACAGT (2) 2 0.002 P0.5 retina ATTTTGCAGA (2) 2 0.002 P0.5 retina CTAGAAGCAG (5) 2 0.002 P0.5 retina GCCCCAGACT (5) 2 0.002 P0.5 retina TGGCCCTGTG (10) 2 0.002 P2.5 retina TAAGATTTCA (2) 37 0.037 P2.5 retina CTAGAAGCAG (5) 7 0.007 P2.5 retina ATTTTGCAGA (2) 1.8 0.0018 P4.5 retina TAAGATTTCA (2) 41.6 0.0416 P4.5 retina CTAGAAGCAG (5) 2 0.002 P6.5 retina TAAGATTTCA (2) 8.3 0.0083 P6.5 retina CTACCGTTGA (2) 3.3 0.0033 P6.5 retina CTAGAAGCAG (5) 1.7 0.0017 P10.5 crx- retina TAAGATTTCA (2) 9.3 0.0093 P10.5 crx- retina GCCCCAGACT (5) 3.7 0.0037 P10.5 crx- retina ATTTTGCAGA (2) 1.9 0.0019 P10.5 crx- retina TGGCCCTGTG (10) 1.9 0.0019 P10.5 crx+ retina TAAGATTTCA (2) 11.5 0.0115 Adult retinal CTAGAAGCAG (5) 1.9 0.0019 Adult retinal GCCCCAGACT (5) 1.9 0.0019 ONL TAAGATTTCA (2) 17.2 0.0172