Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.311063	U2af1	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	17		108121
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | RNA binding | spliceosome complex
Human Homolog	U2AF1[U2(RNU2) small nuclear RNA auxiliary factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTTGAAGC (2) 3.3 0.0033 P8 Cb GC TGGGGTTGGC (6) 1.6 0.0016 Cb medulloblastoma CATTTGAAGC (2) 2.3 0.0023 Cb medulloblastoma GAGACAGATG 2.3 0.0023 P8 GC+1d culture CATTTGAAGC (2) 9.1 0.0091 P8 GC+1d culture GAGACAGATG 1.1 0.0011 P8 GC+SHH+1d culture CATTTGAAGC (2) 11.7 0.0117 P8 GC+SHH+1d culture GAGACAGATG 1.2 0.0012 E15 cortex CATTTGAAGC (2) 4.9 0.0049 E15 cortex TGGGGTTGGC (6) 4.9 0.0049 Hypothalamus CATTTGAAGC (2) 3.6 0.0036 Hypothalamus GAGACAGATG 1.8 0.0018 E12.5 retina CATTTGAAGC (2) 15 0.015 E14.5 retina CATTTGAAGC (2) 3.6 0.0036 E16.5 retina CATTTGAAGC (2) 3.6 0.0036 E16.5 retina GAGACAGATG 3.6 0.0036 E18.5 retina CATTTGAAGC (2) 5.5 0.0055 P0.5 retina CATTTGAAGC (2) 9.8 0.0098 P2.5 retina CATTTGAAGC (2) 8.8 0.0088 P2.5 retina TGGGGTTGGC (6) 1.8 0.0018 P4.5 retina CATTTGAAGC (2) 4 0.004 P6.5 retina CATTTGAAGC (2) 8.3 0.0083 P10.5 crx- retina CATTTGAAGC (2) 3.7 0.0037 P10.5 crx- retina TGGGGTTGGC (6) 3.7 0.0037 P10.5 crx+ retina GAGACAGATG 1.9 0.0019 Adult retinal CATTTGAAGC (2) 1.9 0.0019 Adult retinal GAGACAGATG 1.9 0.0019 Adult retinal TGGGGTTGGC (6) 1.9 0.0019 ONL GAGACAGATG 3.8 0.0038 ONL CATTTGAAGC (2) 1.9 0.0019