Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.311549	Atp6v1d	ATPase, H+ transporting, V1 subunit D	12	12 36.0 cM	73834
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V1D[ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCTGATGT (8) 3.3 0.0033 P8 Cb GC GTCGCAGGCA 1.6 0.0016 P8 Cb GC TTAACTCAGT 1.6 0.0016 Cb medulloblastoma GTCGCAGGCA 4.6 0.0046 Cb medulloblastoma AAGGCTCGAT 2.3 0.0023 Cb medulloblastoma GAGCTGATGT (8) 2.3 0.0023 P8 GC+1d culture GTCGCAGGCA 6.8 0.0068 P8 GC+1d culture GAGCTGATGC (4) 4.6 0.0046 P8 GC+SHH+1d culture GTCGCAGGCA 8.2 0.0082 P8 GC+SHH+1d culture AAGGCTCGAT 1.2 0.0012 P8 GC+SHH+1d culture GAGCTGATGC (4) 1.2 0.0012 3T3 fibroblasts GAGCTGATGC (4) 7 0.007 3T3 fibroblasts GTCACAGGCA (6) 3.5 0.0035 E15 cortex GTCGCAGGCA 14.8 0.0148 E15 cortex GAGCTGATGC (4) 4.9 0.0049 Hypothalamus GTCGCAGGCA 10.9 0.0109 Hypothalamus GGCTGAGGCA (2) 3.6 0.0036 Hypothalamus TTAACTCAGT 3.6 0.0036 Hypothalamus GAGCTGATGT (8) 1.8 0.0018 E12.5 retina GAGCTGATGC (4) 3.8 0.0038 E14.5 retina GTCGCAGGCA 5.5 0.0055 E14.5 retina GAGCTGATGC (4) 1.8 0.0018 E16.5 retina AAGGCTCGAT 1.8 0.0018 E18.5 retina GTCGCAGGCA 1.8 0.0018 P0.5 retina GAGCTGATGC (4) 2 0.002 P0.5 retina GTCGCAGGCA 2 0.002 P2.5 retina GTCGCAGGCA 5.3 0.0053 P4.5 retina GTCGCAGGCA 2 0.002 P6.5 retina GTCGCAGGCA 3.3 0.0033 P6.5 retina GAGCTGATGC (4) 1.7 0.0017 P6.5 retina GAGCTGATGT (8) 1.7 0.0017 P10.5 crx- retina GTCACAGGCA (6) 3.7 0.0037 P10.5 crx- retina GTCGCAGGCA 3.7 0.0037 P10.5 crx+ retina GAGCTGATGC (4) 1.9 0.0019 P10.5 crx+ retina GGCTGAGGCA (2) 1.9 0.0019 P10.5 crx+ retina TTAACTCAGT 1.9 0.0019 Adult retinal GTCGCAGGCA 13 0.013 ONL GTCGCAGGCA 1.9 0.0019