Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.311918	Prkr	protein kinase, interferon-inducible double stranded RNA dependent	17	17 40.0 cM	19106
Gene Ontology	ATP binding | double-stranded RNA binding | immune response | intracellular | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | RNA binding | transferase activity
Human Homolog	PRKR[protein kinase, interferon-inducible double stranded RNA dependent]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCTTCTGGC (4) 6.5 0.0065 P8 Cb GC AAGCCACAGA (2) 3.3 0.0033 Cb medulloblastoma AAGCCACAGA (2) 6.9 0.0069 Cb medulloblastoma CTCTTCTGGC (4) 2.3 0.0023 P8 GC+1d culture AAGCCACAGA (2) 6.8 0.0068 P8 GC+1d culture AGGCAGGCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGCCACAGA (2) 22.2 0.0222 P8 GC+SHH+1d culture AGGCAGGCAG (4) 2.3 0.0023 E15 cortex AAGCCACAGA (2) 4.9 0.0049 Hypothalamus AAGCCACAGA (2) 1.8 0.0018 E12.5 retina AAGCCACAGA (2) 7.5 0.0075 E14.5 retina AAGCCACAGA (2) 3.6 0.0036 E16.5 retina AAGCCACAGA (2) 7.2 0.0072 E16.5 retina CTCTTCTGGC (4) 7.2 0.0072 E16.5 retina AGGCAGGCAG (4) 1.8 0.0018 E18.5 retina AAGCCACAGA (2) 5.5 0.0055 E18.5 retina CTCTTCTGGC (4) 3.6 0.0036 P0.5 retina AAGCCACAGA (2) 3.9 0.0039 P2.5 retina AAGCCACAGA (2) 7 0.007 P2.5 retina AGGCAGGCAG (4) 1.8 0.0018 P4.5 retina AAGCCACAGA (2) 7.9 0.0079 P4.5 retina CTCTTCTGGC (4) 4 0.004 P6.5 retina AAGCCACAGA (2) 5 0.005 P10.5 crx- retina AAGCCACAGA (2) 3.7 0.0037 P10.5 crx+ retina AAGCCACAGA (2) 5.8 0.0058 Adult retinal AAGCCACAGA (2) 1.9 0.0019 ONL AAGCCACAGA (2) 3.8 0.0038