Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3122	Ltbr	lymphotoxin B receptor	6	6 60.4 cM	17000
Gene Ontology	apoptosis | extracellular space | integral to membrane | lymph gland development | receptor activity
Human Homolog	LTBR[lymphotoxin beta receptor (TNFR superfamily, member 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACTGGTGG (5) 1.6 0.0016 P8 Cb GC TGTGGAGGAG (4) 1.6 0.0016 Cb medulloblastoma GTACTGGTGG (5) 2.3 0.0023 Cb medulloblastoma TGTGGAGGAG (4) 2.3 0.0023 P8 GC+1d culture TGTGGAGGAG (4) 2.3 0.0023 P8 GC+1d culture TCTGGATGCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TCTGGATGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGAGGAG (4) 1.2 0.0012 3T3 fibroblasts TGTGGAGGAG (4) 3.5 0.0035 E15 cortex TGTGGAGGAG (4) 4.9 0.0049 Hypothalamus TGTGGAGGAG (4) 5.4 0.0054 Hypothalamus GTACTGGTGG (5) 3.6 0.0036 Hypothalamus TCTGGATGCT (5) 1.8 0.0018 E12.5 retina TCTGTGCATC 1.9 0.0019 E12.5 retina TGTGGAGGAG (4) 1.9 0.0019 E14.5 retina TCTGTGCATC 1.8 0.0018 E14.5 retina TGTGGAGGAG (4) 1.8 0.0018 E16.5 retina TGTGGAGGAG (4) 3.6 0.0036 E16.5 retina TCTGTGCATC 1.8 0.0018 E18.5 retina TGTGGAGGAG (4) 5.5 0.0055 P2.5 retina TGTGGAGGAG (4) 3.5 0.0035 P4.5 retina TGTGGAGGAG (4) 4 0.004 P6.5 retina GATACTGACA (2) 1.7 0.0017 P6.5 retina GTACTGGTGG (5) 1.7 0.0017 P6.5 retina TGTGGAGGAG (4) 1.7 0.0017 P10.5 crx- retina TGTGGAGGAG (4) 14.9 0.0149 P10.5 crx- retina TCTGGATGCT (5) 1.9 0.0019 P10.5 crx+ retina TGTGGAGGAG (4) 7.7 0.0077 Adult retinal TGTGGAGGAG (4) 3.7 0.0037 ONL TCTGGATGCT (5) 3.8 0.0038 ONL TCTGTGCATC 3.8 0.0038