Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.312233	4932409F03Rik	RIKEN cDNA 4932409F03 gene	18		107058
Mm.312233	4930543D07Rik	RIKEN cDNA 4930543D07 gene			75176
Mm.312233	Taf4b	TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	18		72504
Gene Ontology	general RNA polymerase II transcription factor activity | transcription factor complex | transcription from Pol II promoter
Human Homolog	TAF4B[TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC AGCTAAGTAA (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture AGCTAAGTAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture AGCTAAGTAA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AGCTAAGTAA (4) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex AGCTAAGTAA (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex AGCTAAGTAA (4) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina AGCTAAGTAA (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina ACATTACAGA (4) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AGCTAAGTAA (4) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina AGCTAAGTAA (4) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina AGCTAAGTAA (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843 ONL ACATTACAGA (4) 1.9 0.0019