Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.312328
2810481F14Rik
RIKEN cDNA 2810481F14 gene
12
104884
Gene Ontology
DNA repair
|
hydrolase activity
|
nucleus
Human Homolog
TDP1[tyrosyl-DNA phosphodiesterase 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGTGCCCT
(
3
)
6.5
0.0065
Cb medulloblastoma
TGGGTGCCCT
(
3
)
4.6
0.0046
Cb medulloblastoma
TGGGGCCCTC
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGGTGCCCT
(
3
)
3.4
0.0034
P8 GC+1d culture
TGGGGCCCTC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGGTGCCCT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGGGGCTCT (
6
)
1.2
0.0012
3T3 fibroblasts
TGGGTGCCCT
(
3
)
3.5
0.0035
E15 cortex
TGGGTGCCCT
(
3
)
4.9
0.0049
Hypothalamus
TGGGGCCCTC
(
2
)
3.6
0.0036
Hypothalamus
TGGGTGCCCT
(
3
)
1.8
0.0018
E12.5 retina
TGGGTGCCCT
(
3
)
5.6
0.0056
E12.5 retina
CTGGGGCTCT (
6
)
1.9
0.0019
E14.5 retina
CTGGGGCTCT (
6
)
1.8
0.0018
E14.5 retina
TCTCTCACCC (
5
)
1.8
0.0018
E16.5 retina
TGGGTGCCCT
(
3
)
9.1
0.0091
E18.5 retina
TGGGTGCCCT
(
3
)
1.8
0.0018
P0.5 retina
TGGGTGCCCT
(
3
)
11.8
0.0118
P2.5 retina
TCTCTCACCC (
5
)
1.8
0.0018
P2.5 retina
TGGGGCCCTC
(
2
)
1.8
0.0018
P4.5 retina
TGGGTGCCCT
(
3
)
4
0.004
P6.5 retina
TGGGGCCCTC
(
2
)
1.7
0.0017
P6.5 retina
TGGGTGCCCT
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGGTGCCCT
(
3
)
3.7
0.0037
P10.5 crx- retina
TCTCTCACCC (
5
)
1.9
0.0019
P10.5 crx+ retina
TGGGTGCCCT
(
3
)
1.9
0.0019
