Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.315167
Aspn
asporin
13
66695
Gene Ontology
extracellular matrix
|
extracellular space
|
integral to membrane
|
outer membrane
|
porin activity
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAGGACTCA (
3
)
8.2
0.0082
P8 Cb GC
GACTGGGAAG (
9
)
6.5
0.0065
P8 Cb GC
GAACATTTTG
(
4
)
1.6
0.0016
Cb medulloblastoma
ACAGGACTCA (
3
)
4.6
0.0046
Cb medulloblastoma
GACTGGGAAG (
9
)
2.3
0.0023
P8 GC+1d culture
ACAGGACTCA (
3
)
10.3
0.0103
P8 GC+1d culture
GACTGGGAAG (
9
)
3.4
0.0034
P8 GC+1d culture
GAACATTTTG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ACAGGACTCA (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GACTGGGAAG (
9
)
3.5
0.0035
P8 GC+SHH+1d culture
GAACATTTTG
(
4
)
2.3
0.0023
3T3 fibroblasts
ACAGGACTCA (
3
)
21
0.021
E15 cortex
GACTGGGAAG (
9
)
9.9
0.0099
E15 cortex
ACAGGACTCA (
3
)
4.9
0.0049
E15 cortex
GAACATTTTG
(
4
)
4.9
0.0049
P1 cortex
ACAGGACTCA (
3
)
4.5
0.0045
P1 cortex
GCCTGGCCCT (
5
)
4.5
0.0045
Hypothalamus
GAACATTTTG
(
4
)
1.8
0.0018
Hypothalamus
GACTGGGAAG (
9
)
1.8
0.0018
E12.5 retina
ACAGGACTCA (
3
)
5.6
0.0056
E12.5 retina
GACTGGGAAG (
9
)
1.9
0.0019
E12.5 retina
GGAGAAAGGT (
4
)
1.9
0.0019
E14.5 retina
GACTGGGAAG (
9
)
1.8
0.0018
E14.5 retina
TCATCTGCAA (
4
)
1.8
0.0018
E16.5 retina
ACAGGACTCA (
3
)
7.2
0.0072
E16.5 retina
GACTGGGAAG (
9
)
3.6
0.0036
E16.5 retina
GAACATTTTG
(
4
)
1.8
0.0018
E18.5 retina
ACAGGACTCA (
3
)
7.3
0.0073
E18.5 retina
GAACATTTTG
(
4
)
3.6
0.0036
E18.5 retina
GCCTGGCCCT (
5
)
1.8
0.0018
E18.5 retina
TCATCTGCAA (
4
)
1.8
0.0018
P0.5 retina
ACAGGACTCA (
3
)
5.9
0.0059
P0.5 retina
GACTGGGAAG (
9
)
5.9
0.0059
P0.5 retina
GAACATTTTG
(
4
)
3.9
0.0039
P2.5 retina
ACAGGACTCA (
3
)
7
0.007
P2.5 retina
GACTGGGAAG (
9
)
7
0.007
P2.5 retina
GAACATTTTG
(
4
)
1.8
0.0018
P4.5 retina
ACAGGACTCA (
3
)
9.9
0.0099
P4.5 retina
GACTGGGAAG (
9
)
2
0.002
P4.5 retina
GCCTGGCCCT (
5
)
2
0.002
P6.5 retina
GACTGGGAAG (
9
)
5
0.005
P6.5 retina
GCCTGGCCCT (
5
)
1.7
0.0017
P10.5 crx- retina
ACAGGACTCA (
3
)
5.6
0.0056
P10.5 crx- retina
GCCTGGCCCT (
5
)
5.6
0.0056
P10.5 crx- retina
GACTGGGAAG (
9
)
3.7
0.0037
P10.5 crx- retina
GGAGAAAGGT (
4
)
1.9
0.0019
P10.5 crx+ retina
ACAGGACTCA (
3
)
3.8
0.0038
P10.5 crx+ retina
GACTGGGAAG (
9
)
3.8
0.0038
P10.5 crx+ retina
GCCTGGCCCT (
5
)
3.8
0.0038
Adult retinal
GACTGGGAAG (
9
)
3.7
0.0037
Adult retinal
GGAGAAAGGT (
4
)
3.7
0.0037
Adult retinal
ACAGGACTCA (
3
)
1.9
0.0019
ONL
ACAGGACTCA (
3
)
3.8
0.0038
ONL
GCCTGGCCCT (
5
)
1.9
0.0019
ONL
TCATCTGCAA (
4
)
1.9
0.0019
