Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.315909
Hnrph2
heterogeneous nuclear ribonucleoprotein H2
X
X 51.0 cM
56258
Human Homolog
HNRPH2[heterogeneous nuclear ribonucleoprotein H2 (H')]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 79 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
TTTGTTAATT
(
4
)
26.1
0.0261
P8 Cb GC
AATAAAAGCT (
4
)
3.3
0.0033
P8 Cb GC
TTATTTGTAT
(
3
)
3.3
0.0033
P8 Cb GC
ACCAAACTCC
(
7
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
TTTGTTAATT
(
4
)
6.9
0.0069
Cb medulloblastoma
ACCAAACTCC
(
7
)
4.6
0.0046
Cb medulloblastoma
CATCTGAAGT
2.3
0.0023
P8 GC+1d culture
TTTGTTAATT
(
4
)
37.7
0.0377
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
TTATTTGTAT
(
3
)
8
0.008
P8 GC+1d culture
ACCAAACTCC
(
7
)
4.6
0.0046
P8 GC+1d culture
AATAAAAGCT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
TTTGTTAATT
(
4
)
17.6
0.0176
P8 GC+SHH+1d culture
TTATTTGTAT
(
3
)
7
0.007
P8 GC+SHH+1d culture
ACCAAACTCC
(
7
)
3.5
0.0035
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
E15 cortex
ACCAAACTCC
(
7
)
4.9
0.0049
E15 cortex
TTTGTTAATT
(
4
)
4.9
0.0049
P1 cortex
TTTGTTAATT
(
4
)
27.3
0.0273
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
ACCAAACTCC
(
7
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
TTTGTTAATT
(
4
)
9.1
0.0091
Hypothalamus
ACCAAACTCC
(
7
)
1.8
0.0018
Hypothalamus
CATCTGAAGT
1.8
0.0018
Hypothalamus
TTATTTGTAT
(
3
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
TTTGTTAATT
(
4
)
20.7
0.0207
E12.5 retina
TTATTTGTAT
(
3
)
3.8
0.0038
E12.5 retina
ACCAAACTCC
(
7
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
TTTGTTAATT
(
4
)
29.2
0.0292
E14.5 retina
ACCAAACTCC
(
7
)
5.5
0.0055
E14.5 retina
GGGACACAGA (
6
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
TTTGTTAATT
(
4
)
16.3
0.0163
E16.5 retina
ACCAAACTCC
(
7
)
1.8
0.0018
E16.5 retina
CATCTGAAGT
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
TTTGTTAATT
(
4
)
9.1
0.0091
E18.5 retina
TTATTTGTAT
(
3
)
5.5
0.0055
E18.5 retina
ACCAAACTCC
(
7
)
1.8
0.0018
E18.5 retina
CATCTGAAGT
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
TTTGTTAATT
(
4
)
15.7
0.0157
P2.5 retina
TTTGTTAATT
(
4
)
37
0.037
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
TTATTTGTAT
(
3
)
7
0.007
P2.5 retina
ACCAAACTCC
(
7
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
TTTGTTAATT
(
4
)
23.8
0.0238
P4.5 retina
ACCAAACTCC
(
7
)
5.9
0.0059
P4.5 retina
GGGACACAGA (
6
)
2
0.002
P4.5 retina
TTATTTGTAT
(
3
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
TTTGTTAATT
(
4
)
21.7
0.0217
P6.5 retina
ACCAAACTCC
(
7
)
3.3
0.0033
P6.5 retina
GGGACACAGA (
6
)
1.7
0.0017
P6.5 retina
TTATTTGTAT
(
3
)
1.7
0.0017
P6.5 retina
TTGAAAAACA (
9
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
TTTGTTAATT
(
4
)
18.6
0.0186
P10.5 crx- retina
TTATTTGTAT
(
3
)
3.7
0.0037
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
TTTGTTAATT
(
4
)
11.5
0.0115
P10.5 crx+ retina
TTATTTGTAT
(
3
)
3.8
0.0038
P10.5 crx+ retina
ACCAAACTCC
(
7
)
1.9
0.0019
P10.5 crx+ retina
CATCTGAAGT
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
TTTGTTAATT
(
4
)
9.3
0.0093
Adult retinal
ACCAAACTCC
(
7
)
5.6
0.0056
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
TTTGTTAATT
(
4
)
15.3
0.0153
ONL
TTGAAAAACA (
9
)
3.8
0.0038
ONL
AATAAAAGCT (
4
)
1.9
0.0019
ONL
ACCAAACTCC
(
7
)
1.9
0.0019
