Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.317041
C330011F01Rik
RIKEN cDNA C330011F01 gene
78605
Mm.317041
6430706D22Rik
RIKEN cDNA 6430706D22 gene
1
381280
Human Homolog
DKFZp762E1312[hypothetical protein DKFZp762E1312]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCCAGGGCA
(
6
)
22.8
0.0228
P8 Cb GC
CCCCTTCCCA (
7
)
6.5
0.0065
P8 Cb GC
CTGGACCAGC (
4
)
1.6
0.0016
P8 Cb GC
CTTGAGGTGC
(
2
)
1.6
0.0016
P8 Cb GC
GACCCCAAAG (
4
)
1.6
0.0016
P8 Cb GC
GGCTTTGCTG
(
6
)
1.6
0.0016
Cb medulloblastoma
CCCCTTCCCA (
7
)
18.5
0.0185
Cb medulloblastoma
AGCAGAGAGC (
8
)
2.3
0.0023
Cb medulloblastoma
CTCCAGGGCA
(
6
)
2.3
0.0023
Cb medulloblastoma
GACCCCAAAG (
4
)
2.3
0.0023
Cb medulloblastoma
GCTTGCTGTG
(
7
)
2.3
0.0023
P8 GC+1d culture
CCCCTTCCCA (
7
)
9.1
0.0091
P8 GC+1d culture
CAGCACCCAC
(
2
)
3.4
0.0034
P8 GC+1d culture
CTCCAGGGCA
(
6
)
3.4
0.0034
P8 GC+1d culture
GGCTTTGCTG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCCTTCCCA (
7
)
11.7
0.0117
P8 GC+SHH+1d culture
CTCCAGGGCA
(
6
)
7
0.007
P8 GC+SHH+1d culture
AGCAGAGAGC (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGCACCCAC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GACCCCAAAG (
4
)
1.2
0.0012
3T3 fibroblasts
CTCCAGGGCA
(
6
)
24.5
0.0245
3T3 fibroblasts
CAGCACCCAC
(
2
)
3.5
0.0035
3T3 fibroblasts
CTGGACCAGC (
4
)
3.5
0.0035
3T3 fibroblasts
CTTGAGGTGC
(
2
)
3.5
0.0035
3T3 fibroblasts
GCTTGCTGTG
(
7
)
3.5
0.0035
E15 cortex
CTCCAGGGCA
(
6
)
9.9
0.0099
E15 cortex
CTGGACCAGC (
4
)
4.9
0.0049
P1 cortex
CCCCTTCCCA (
7
)
4.5
0.0045
P1 cortex
CTCCAGGGCA
(
6
)
4.5
0.0045
Hypothalamus
CCCCTTCCCA (
7
)
3.6
0.0036
Hypothalamus
CTCCAGGGCA
(
6
)
3.6
0.0036
E12.5 retina
CTCCAGGGCA
(
6
)
13.1
0.0131
E12.5 retina
CCCCTTCCCA (
7
)
1.9
0.0019
E12.5 retina
CTGGACCAGC (
4
)
1.9
0.0019
E14.5 retina
CTCCAGGGCA
(
6
)
20
0.02
E14.5 retina
GATAAAAACA
(
6
)
3.6
0.0036
E14.5 retina
AGCAGAGAGC (
8
)
1.8
0.0018
E16.5 retina
CTCCAGGGCA
(
6
)
23.5
0.0235
E16.5 retina
CAGCACCCAC
(
2
)
1.8
0.0018
E16.5 retina
GGCTTTGCTG
(
6
)
1.8
0.0018
E18.5 retina
CTCCAGGGCA
(
6
)
18.2
0.0182
E18.5 retina
CCCCTTCCCA (
7
)
3.6
0.0036
E18.5 retina
CTTGAGGTGC
(
2
)
1.8
0.0018
P0.5 retina
CTCCAGGGCA
(
6
)
21.6
0.0216
P0.5 retina
GACCCCAAAG (
4
)
2
0.002
P2.5 retina
CTCCAGGGCA
(
6
)
19.4
0.0194
P2.5 retina
CCCCTTCCCA (
7
)
1.8
0.0018
P2.5 retina
GACCCCAAAG (
4
)
1.8
0.0018
P4.5 retina
CTCCAGGGCA
(
6
)
27.7
0.0277
P4.5 retina
CCCCTTCCCA (
7
)
5.9
0.0059
P4.5 retina
AGCAGAGAGC (
8
)
2
0.002
P4.5 retina
GATAAAAACA
(
6
)
2
0.002
P6.5 retina
CTCCAGGGCA
(
6
)
13.3
0.0133
P6.5 retina
CCCCTTCCCA (
7
)
6.7
0.0067
P6.5 retina
GCTTGCTGTG
(
7
)
1.7
0.0017
P10.5 crx- retina
CTCCAGGGCA
(
6
)
1.9
0.0019
P10.5 crx+ retina
CCCCTTCCCA (
7
)
1.9
0.0019
Adult retinal
CCCCTTCCCA (
7
)
7.4
0.0074
Adult retinal
AGCAGAGAGC (
8
)
1.9
0.0019
Adult retinal
CTCCAGGGCA
(
6
)
1.9
0.0019
Adult retinal
GGCTTTGCTG
(
6
)
1.9
0.0019
