Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3172
Grcc10
gene rich cluster, C10 gene
6
6 60.22 cM
14790
Human Homolog
GRCC10[likely ortholog of mouse gene rich cluster, C10 gene]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCCTGCTTC
(
2
)
35.9
0.0359
P8 Cb GC
GGCCTGCTTA
(
2
)
3.3
0.0033
Cb medulloblastoma
GGCCTGCTTC
(
2
)
37
0.037
Cb medulloblastoma
GGCCTGCTTA
(
2
)
2.3
0.0023
P8 GC+1d culture
GGCCTGCTTC
(
2
)
29.7
0.0297
P8 GC+1d culture
CGCACGGCAT
1.1
0.0011
P8 GC+1d culture
GGTGGCAGGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCCTGCTTC
(
2
)
25.8
0.0258
P8 GC+SHH+1d culture
GGCCTGCTTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCTGCTTT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTGGCAGGA
(
3
)
1.2
0.0012
3T3 fibroblasts
GGCCTGCTTC
(
2
)
38.6
0.0386
3T3 fibroblasts
GGCCTGCTTA
(
2
)
3.5
0.0035
E15 cortex
GGCCTGCTTC
(
2
)
34.6
0.0346
E15 cortex
GGTGGCAGGA
(
3
)
4.9
0.0049
P1 cortex
GGCCTGCTTC
(
2
)
18.2
0.0182
P1 cortex
GCCTGCTTCT
(
4
)
4.5
0.0045
Hypothalamus
GGCCTGCTTC
(
2
)
16.3
0.0163
Hypothalamus
GGTGGCAGGA
(
3
)
5.4
0.0054
E12.5 retina
GGCCTGCTTC
(
2
)
26.3
0.0263
E12.5 retina
CGCACGGCAT
1.9
0.0019
E12.5 retina
GGCCTGCTTA
(
2
)
1.9
0.0019
E14.5 retina
GGCCTGCTTC
(
2
)
20
0.02
E14.5 retina
CGCACGGCAT
1.8
0.0018
E14.5 retina
GGCCTGCTTA
(
2
)
1.8
0.0018
E16.5 retina
GGCCTGCTTC
(
2
)
50.7
0.0507
E16.5 retina
GGTGGCAGGA
(
3
)
7.2
0.0072
E18.5 retina
GGCCTGCTTC
(
2
)
29.1
0.0291
E18.5 retina
GGCCTGCTTT
(
3
)
1.8
0.0018
P0.5 retina
GGCCTGCTTC
(
2
)
23.6
0.0236
P0.5 retina
CGCACGGCAT
2
0.002
P2.5 retina
GGCCTGCTTC
(
2
)
29.9
0.0299
P2.5 retina
CGCACGGCAT
3.5
0.0035
P2.5 retina
GGCCTGCTTA
(
2
)
1.8
0.0018
P2.5 retina
GGCCTGCTTT
(
3
)
1.8
0.0018
P4.5 retina
GGCCTGCTTC
(
2
)
27.7
0.0277
P4.5 retina
GCCTGCTTCT
(
4
)
2
0.002
P4.5 retina
GGTGGCAGGA
(
3
)
2
0.002
P6.5 retina
GGCCTGCTTC
(
2
)
48.4
0.0484
P6.5 retina
GGCCTGCTTT
(
3
)
3.3
0.0033
P6.5 retina
CGCACGGCAT
1.7
0.0017
P6.5 retina
GGTGGCAGGA
(
3
)
1.7
0.0017
P10.5 crx- retina
GGCCTGCTTC
(
2
)
78
0.078
P10.5 crx- retina
GGTGGCAGGA
(
3
)
7.4
0.0074
P10.5 crx- retina
GCCTGCTTCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGCCTGCTTC
(
2
)
69.2
0.0692
P10.5 crx+ retina
GGCCTGCTTA
(
2
)
3.8
0.0038
P10.5 crx+ retina
GGTGGCAGGA
(
3
)
3.8
0.0038
P10.5 crx+ retina
GGCCTGCTTT
(
3
)
1.9
0.0019
Adult retinal
GGCCTGCTTC
(
2
)
18.5
0.0185
Adult retinal
GGCCTGCTTA
(
2
)
1.9
0.0019
ONL
GGCCTGCTTC
(
2
)
17.2
0.0172
ONL
GGTGGCAGGA
(
3
)
1.9
0.0019
