Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.318310	C130058G22Rik	RIKEN cDNA C130058G22 gene	14		319955
Mm.318310	Ercc6	excision repair cross-complementing rodent repair deficiency, complementation group 6	14		218892
Gene Ontology	nucleus | pyrimidine dimer repair | response to oxidative stress | transcription-coupled nucleotide-excision repair
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATAAAAAT (10) 32.6 0.0326 P8 Cb GC ACAGTTCCAG (7) 3.3 0.0033 Cb medulloblastoma TAATAAAAAT (10) 9.2 0.0092 P8 GC+1d culture TAATAAAAAT (10) 30.8 0.0308 P8 GC+1d culture TTCACAGATC (4) 3.4 0.0034 P8 GC+1d culture ATGCCCTTTT (4) 2.3 0.0023 P8 GC+1d culture GTTATCCAGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TAATAAAAAT (10) 60.9 0.0609 P8 GC+SHH+1d culture ATGCCCTTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture ACAGTTCCAG (7) 1.2 0.0012 P8 GC+SHH+1d culture GTTATCCAGC (2) 1.2 0.0012 3T3 fibroblasts ACAGTTCCAG (7) 3.5 0.0035 E15 cortex ACAGTTCCAG (7) 9.9 0.0099 E15 cortex TAATAAAAAT (10) 4.9 0.0049 P1 cortex CAAGCAATTC (3) 4.5 0.0045 P1 cortex TAATAAAAAT (10) 4.5 0.0045 Hypothalamus TAATAAAAAT (10) 7.2 0.0072 Hypothalamus ACAGTTCCAG (7) 1.8 0.0018 Hypothalamus ATGCCATCTT (4) 1.8 0.0018 Hypothalamus ATTAAAAATG (4) 1.8 0.0018 E12.5 retina TAATAAAAAT (10) 18.8 0.0188 E12.5 retina TTCACAGATC (4) 3.8 0.0038 E12.5 retina CAAGCAATTC (3) 1.9 0.0019 E12.5 retina GAAATGTGCC (5) 1.9 0.0019 E14.5 retina TAATAAAAAT (10) 72.9 0.0729 E14.5 retina ACAGTTCCAG (7) 3.6 0.0036 E14.5 retina ATTAAAAATG (4) 1.8 0.0018 E14.5 retina CAAGCAATTC (3) 1.8 0.0018 E16.5 retina TAATAAAAAT (10) 48.9 0.0489 E16.5 retina ACAGTTCCAG (7) 3.6 0.0036 E18.5 retina TAATAAAAAT (10) 70.9 0.0709 E18.5 retina ACAGTTCCAG (7) 1.8 0.0018 E18.5 retina GTTATCCAGC (2) 1.8 0.0018 P0.5 retina ACAGTTCCAG (7) 11.8 0.0118 P0.5 retina TAATAAAAAT (10) 5.9 0.0059 P0.5 retina CAAGCAATTC (3) 2 0.002 P0.5 retina TTCACAGATC (4) 2 0.002 P2.5 retina TAATAAAAAT (10) 49.3 0.0493 P2.5 retina ACAGTTCCAG (7) 1.8 0.0018 P2.5 retina ATGCCCTTTT (4) 1.8 0.0018 P4.5 retina TAATAAAAAT (10) 25.8 0.0258 P4.5 retina GTTATCCAGC (2) 4 0.004 P4.5 retina GAAATGTGCC (5) 2 0.002 P6.5 retina TAATAAAAAT (10) 41.7 0.0417 P6.5 retina GTTATCCAGC (2) 3.3 0.0033 P6.5 retina CAAGCAATTC (3) 1.7 0.0017 P6.5 retina GAAATGTGCC (5) 1.7 0.0017 P6.5 retina TTCACAGATC (4) 1.7 0.0017 P10.5 crx- retina TAATAAAAAT (10) 5.6 0.0056 P10.5 crx- retina ACAGTTCCAG (7) 1.9 0.0019 P10.5 crx- retina ATGCCATCTT (4) 1.9 0.0019 P10.5 crx- retina CAAGCAATTC (3) 1.9 0.0019 P10.5 crx- retina GAAATGTGCC (5) 1.9 0.0019 P10.5 crx- retina TTCACAGATC (4) 1.9 0.0019 P10.5 crx+ retina TAATAAAAAT (10) 28.8 0.0288 P10.5 crx+ retina ACAGTTCCAG (7) 3.8 0.0038 P10.5 crx+ retina ATGCCATCTT (4) 1.9 0.0019 P10.5 crx+ retina GAAATGTGCC (5) 1.9 0.0019 Adult retinal TAATAAAAAT (10) 14.8 0.0148 ONL TAATAAAAAT (10) 59.4 0.0594 ONL ATTAAAAATG (4) 1.9 0.0019 ONL CAAGCAATTC (3) 1.9 0.0019 ONL GAAATGTGCC (5) 1.9 0.0019