Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.31927	Tm4sf9	transmembrane 4 superfamily member 9	3		56224
Gene Ontology	cell adhesion | cell motility | cell proliferation | integral to membrane | mystery cell fate differentiation (sensu Drosophila)
Human Homolog	TM4SF9[transmembrane 4 superfamily member 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AGGTTTTTCT (7) 1.6 0.0016 P8 Cb GC GACACTCGTG 1.6 0.0016 P8 Cb GC TGACAATATT (3) 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma AGGTTTTTCT (7) 4.6 0.0046 Cb medulloblastoma CGCCCTTCAT 2.3 0.0023 Cb medulloblastoma GACACTCGTG 2.3 0.0023 Cb medulloblastoma TGCTCGCTGA 2.3 0.0023 Cb medulloblastoma TTATTTTCAA (5) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GACACTCGTG 6.8 0.0068 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture CACTATACTA (3) 2.3 0.0023 P8 GC+1d culture TGACAATATT (3) 1.1 0.0011 P8 GC+1d culture TGCTCGCTGA 1.1 0.0011 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture TGACAATATT (3) 7 0.007 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GACACTCGTG 3.5 0.0035 P8 GC+SHH+1d culture AGGTTTTTCT (7) 2.3 0.0023 P8 GC+SHH+1d culture CGCCCTTCAT 1.2 0.0012 P8 GC+SHH+1d culture TGCTCGCTGA 1.2 0.0012 3T3 fibroblasts GACACTCGTG 10.5 0.0105 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TGACAATATT (3) 36.4 0.0364 P1 cortex AGGTTTTTCT (7) 4.5 0.0045 P1 cortex CACTATACTA (3) 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CACTATACTA (3) 1.8 0.0018 Hypothalamus TTATTTTCAA (5) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AGGTTTTTCT (7) 1.8 0.0018 E16.5 retina GACACTCGTG 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina TGACAATATT (3) 1.8 0.0018 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GACACTCGTG 2 0.002 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AGGTTTTTCT (7) 1.8 0.0018 P2.5 retina CGCCCTTCAT 1.8 0.0018 P2.5 retina GACACTCGTG 1.8 0.0018 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GACACTCGTG 1.7 0.0017 P6.5 retina TGACAATATT (3) 1.7 0.0017 P6.5 retina TGCTCGCTGA 1.7 0.0017 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina AGGTTTTTCT (7) 1.9 0.0019 P10.5 crx- retina TGACAATATT (3) 1.9 0.0019 P10.5 crx- retina TGCTCGCTGA 1.9 0.0019 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal GACACTCGTG 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal AGGTTTTTCT (7) 1.9 0.0019 Adult retinal TGCTCGCTGA 1.9 0.0019 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL CACTATACTA (3) 3.8 0.0038 ONL GACACTCGTG 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038