Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3196	Ganab	alpha glucosidase 2 alpha neutral subunit	19		14376
Gene Ontology	alpha-glucosidase complex | carbohydrate metabolism | endoplasmic reticulum | extracellular space | glucosidase activity | Golgi apparatus | hydrolase activity | hydrolase activity, hydrolyzing O-glycosyl compounds | N-glycan processing | protein binding
Human Homolog	GANAB[glucosidase, alpha; neutral AB] | GANAB[glucosidase, alpha; neutral AB]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TGTACCCAGG 4.9 0.0049 P8 Cb GC AGGCCCCTCT (2) 1.6 0.0016 P8 Cb GC GTTGTGAGTC (2) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma GTTGTGAGTC (2) 11.6 0.0116 Cb medulloblastoma TGTACCCAGG 4.6 0.0046 Cb medulloblastoma CTTGAAAGCC (4) 2.3 0.0023 Cb medulloblastoma GCTGACAGCC (4) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TGTACCCAGG 12.6 0.0126 P8 GC+1d culture GCTGACAGCC (4) 2.3 0.0023 P8 GC+1d culture CTTGAAAGCC (4) 1.1 0.0011 P8 GC+1d culture GAAGAAAAAA (18) 1.1 0.0011 P8 GC+1d culture GAGGCTGGGA (9) 1.1 0.0011 P8 GC+1d culture GTTGTGAGTC (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture TGTACCCAGG 8.2 0.0082 P8 GC+SHH+1d culture GAGGCTGGGA (9) 3.5 0.0035 P8 GC+SHH+1d culture ATCGTCTCCC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTTGTGAGTC (2) 2.3 0.0023 P8 GC+SHH+1d culture CTTGAAAGCC (4) 1.2 0.0012 P8 GC+SHH+1d culture GAAGAAAAAA (18) 1.2 0.0012 P8 GC+SHH+1d culture GCTGACAGCC (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCAGCTTTG (8) 1.2 0.0012 3T3 fibroblasts TGTACCCAGG 31.5 0.0315 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 E15 cortex TGTACCCAGG 19.8 0.0198 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus GCTGACAGCC (4) 7.2 0.0072 Hypothalamus GTTGTGAGTC (2) 7.2 0.0072 Hypothalamus GGGACTGCTG (2) 3.6 0.0036 Hypothalamus AGGCCCCTCT (2) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina TGTACCCAGG 16.9 0.0169 E12.5 retina GAAGAAAAAA (18) 1.9 0.0019 E12.5 retina GTTGTGAGTC (2) 1.9 0.0019 E12.5 retina TAAAAACAAA (5) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina AGGCCCCTCT (2) 3.6 0.0036 E14.5 retina GAAGAAAAAA (18) 1.8 0.0018 E14.5 retina GCTGACAGCC (4) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TGTACCCAGG 5.4 0.0054 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina TGTACCCAGG 5.5 0.0055 E18.5 retina GTTGTGAGTC (2) 3.6 0.0036 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TGTACCCAGG 9.8 0.0098 P0.5 retina ATGGTATTGA 2 0.002 P0.5 retina GAGGCTGGGA (9) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina TGTACCCAGG 19.4 0.0194 P2.5 retina GTTGTGAGTC (2) 3.5 0.0035 P2.5 retina GAAGAAAAAA (18) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina GTTGTGAGTC (2) 5.9 0.0059 P4.5 retina TGTACCCAGG 4 0.004 P4.5 retina GGGACTGCTG (2) 2 0.002 P4.5 retina TTCAGCTTTG (8) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina TGTACCCAGG 16.7 0.0167 P6.5 retina GTTGTGAGTC (2) 6.7 0.0067 P6.5 retina GAGGCTGGGA (9) 5 0.005 P6.5 retina GAAGAAAAAA (18) 1.7 0.0017 P6.5 retina GCTGACAGCC (4) 1.7 0.0017 P6.5 retina TAAAAACAAA (5) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina TGTACCCAGG 22.3 0.0223 P10.5 crx- retina GTTGTGAGTC (2) 11.1 0.0111 P10.5 crx- retina ATGGTATTGA 1.9 0.0019 P10.5 crx- retina GCTGACAGCC (4) 1.9 0.0019 P10.5 crx- retina TAAAAACAAA (5) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina TGTACCCAGG 15.4 0.0154 P10.5 crx+ retina ATCGTCTCCC (2) 1.9 0.0019 P10.5 crx+ retina GTTGTGAGTC (2) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal GTTGTGAGTC (2) 5.6 0.0056 Adult retinal TGTACCCAGG 5.6 0.0056 ONL TGTGTGTGTG (115) 23 0.023 ONL TGTACCCAGG 5.7 0.0057 ONL GTTGTGAGTC (2) 3.8 0.0038 ONL TTCAGCTTTG (8) 3.8 0.0038 ONL ATGGTATTGA 1.9 0.0019 ONL GAAGAAAAAA (18) 1.9 0.0019 ONL TAAAAACAAA (5) 1.9 0.0019