Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.32081
D130086K05Rik
RIKEN cDNA D130086K05 gene
9
319882
Mm.32081
9930116O05Rik
RIKEN cDNA 9930116O05 gene
9
319758
Human Homolog
FLJ12994[hypothetical protein FLJ12994]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTTATGGAA (
5
)
1.6
0.0016
P8 Cb GC
GGGAAAAAAA (
36
)
1.6
0.0016
P8 Cb GC
TGCATTTATA
(
2
)
1.6
0.0016
Cb medulloblastoma
GGGAAAAAAA (
36
)
92.5
0.0925
Cb medulloblastoma
ATTTATGGAA (
5
)
4.6
0.0046
P8 GC+1d culture
ACATTAAGAT
(
2
)
1.1
0.0011
P8 GC+1d culture
ATTTATGGAA (
5
)
1.1
0.0011
P8 GC+1d culture
GGGAAAAAAA (
36
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGAAGCAAA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
ATTTATGGAA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGAAAAAAA (
36
)
1.2
0.0012
P1 cortex
ATGCAAACAG
(
2
)
4.5
0.0045
P1 cortex
GGGAAAAAAA (
36
)
4.5
0.0045
Hypothalamus
GGGAAAAAAA (
36
)
41.7
0.0417
Hypothalamus
ATTTATGGAA (
5
)
3.6
0.0036
E12.5 retina
ATTTATGGAA (
5
)
7.5
0.0075
E14.5 retina
ATTTATGGAA (
5
)
5.5
0.0055
E14.5 retina
GGGAAAAAAA (
36
)
1.8
0.0018
E16.5 retina
ATTTATGGAA (
5
)
7.2
0.0072
E16.5 retina
GGGAAAAAAA (
36
)
3.6
0.0036
E16.5 retina
AAGTAAATAA
(
4
)
1.8
0.0018
E18.5 retina
ATTTATGGAA (
5
)
3.6
0.0036
E18.5 retina
GGGAAAAAAA (
36
)
1.8
0.0018
P0.5 retina
ATGCAAACAG
(
2
)
5.9
0.0059
P0.5 retina
GGGAAAAAAA (
36
)
3.9
0.0039
P0.5 retina
AAGTAAATAA
(
4
)
2
0.002
P0.5 retina
ATTTATGGAA (
5
)
2
0.002
P2.5 retina
ATTTATGGAA (
5
)
12.3
0.0123
P2.5 retina
GGGAAAAAAA (
36
)
7
0.007
P2.5 retina
TGCATTTATA
(
2
)
1.8
0.0018
P4.5 retina
GGGAAAAAAA (
36
)
9.9
0.0099
P4.5 retina
ATTTATGGAA (
5
)
5.9
0.0059
P4.5 retina
ACATTAAGAT
(
2
)
2
0.002
P4.5 retina
TGCATTTATA
(
2
)
2
0.002
P6.5 retina
GGGAAAAAAA (
36
)
20
0.02
P6.5 retina
ATTTATGGAA (
5
)
3.3
0.0033
P6.5 retina
TGCATTTATA
(
2
)
1.7
0.0017
P10.5 crx- retina
AAGTAAATAA
(
4
)
14.9
0.0149
P10.5 crx- retina
GGGAAAAAAA (
36
)
11.1
0.0111
P10.5 crx- retina
ATTTATGGAA (
5
)
1.9
0.0019
P10.5 crx- retina
GTGAAGCAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGGAAAAAAA (
36
)
23.1
0.0231
P10.5 crx+ retina
ATTTATGGAA (
5
)
5.8
0.0058
P10.5 crx+ retina
AAGTAAATAA
(
4
)
3.8
0.0038
P10.5 crx+ retina
ACATTAAGAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
ATGCAAACAG
(
2
)
1.9
0.0019
Adult retinal
GGGAAAAAAA (
36
)
35.2
0.0352
Adult retinal
ACATTAAGAT
(
2
)
1.9
0.0019
Adult retinal
ATTTATGGAA (
5
)
1.9
0.0019
ONL
GGGAAAAAAA (
36
)
30.6
0.0306
ONL
ATTTATGGAA (
5
)
3.8
0.0038
ONL
ACATTAAGAT
(
2
)
1.9
0.0019
