Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.32084
3000004C01Rik
RIKEN cDNA 3000004C01 gene
11
70218
Gene Ontology
ATP binding
|
motor activity
Human Homolog
LOC146909[hypothetical protein LOC146909]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACTGGTTCC (
6
)
11.4
0.0114
P8 GC+1d culture
GCAAAAGCAA (
3
)
5.7
0.0057
P8 GC+1d culture
TATTGTATTT
2.3
0.0023
P8 GC+1d culture
GACTGGTTCC (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCAAAAGCAA (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
GACTGGTTCC (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TGAATGTGGA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTGTATTT
1.2
0.0012
3T3 fibroblasts
GCAAAAGCAA (
3
)
3.5
0.0035
3T3 fibroblasts
GTGATGGCTG (
8
)
3.5
0.0035
P1 cortex
GTGATGGCTG (
8
)
4.5
0.0045
Hypothalamus
GCAAAAGCAA (
3
)
1.8
0.0018
E12.5 retina
GCAAAAGCAA (
3
)
7.5
0.0075
E12.5 retina
GACTGGTTCC (
6
)
1.9
0.0019
E14.5 retina
GACTGGTTCC (
6
)
1.8
0.0018
E14.5 retina
GCAAAAGCAA (
3
)
1.8
0.0018
E14.5 retina
GTGATGGCTG (
8
)
1.8
0.0018
E14.5 retina
TATTGTATTT
1.8
0.0018
E14.5 retina
TGAATGTGGA (
3
)
1.8
0.0018
E16.5 retina
GACTGGTTCC (
6
)
9.1
0.0091
E16.5 retina
GCAAAAGCAA (
3
)
1.8
0.0018
E16.5 retina
GTGATGGCTG (
8
)
1.8
0.0018
E16.5 retina
TATTGTATTT
1.8
0.0018
E18.5 retina
GACTGGTTCC (
6
)
3.6
0.0036
E18.5 retina
GCAAAAGCAA (
3
)
3.6
0.0036
P0.5 retina
GCAAAAGCAA (
3
)
11.8
0.0118
P0.5 retina
GACTGGTTCC (
6
)
7.9
0.0079
P2.5 retina
GACTGGTTCC (
6
)
7
0.007
P2.5 retina
GCAAAAGCAA (
3
)
5.3
0.0053
P4.5 retina
GACTGGTTCC (
6
)
5.9
0.0059
P4.5 retina
GCAAAAGCAA (
3
)
4
0.004
P6.5 retina
GCAAAAGCAA (
3
)
5
0.005
P6.5 retina
GACTGGTTCC (
6
)
1.7
0.0017
P6.5 retina
TGAATGTGGA (
3
)
1.7
0.0017
P10.5 crx- retina
GACTGGTTCC (
6
)
11.1
0.0111
P10.5 crx- retina
GCAAAAGCAA (
3
)
3.7
0.0037
P10.5 crx+ retina
GACTGGTTCC (
6
)
3.8
0.0038
P10.5 crx+ retina
GCAAAAGCAA (
3
)
1.9
0.0019
P10.5 crx+ retina
GTGATGGCTG (
8
)
1.9
0.0019
P10.5 crx+ retina
TGAATGTGGA (
3
)
1.9
0.0019
Adult retinal
GACTGGTTCC (
6
)
1.9
0.0019
ONL
GCAAAAGCAA (
3
)
9.6
0.0096
ONL
TATTGTATTT
1.9
0.0019
ONL
TGAATGTGGA (
3
)
1.9
0.0019
