Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3217	Ass1	argininosuccinate synthetase 1	2	2 20.0 cM	11898
Gene Ontology	arginine biosynthesis | argininosuccinate synthase activity | ATP binding | ligase activity | urea cycle
Human Homolog	ASS[argininosuccinate synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTGGGGGGG (15) 27.7 0.0277 P8 Cb GC GAAAGGAAAC (7) 8.2 0.0082 P8 Cb GC GGGAGGGAGG (4) 4.9 0.0049 P8 Cb GC ATGAGGCTGG (3) 1.6 0.0016 P8 Cb GC CAATAGAGAC 1.6 0.0016 P8 Cb GC TTCTCTGCCA (6) 1.6 0.0016 Cb medulloblastoma GGTGGGGGGG (15) 23.1 0.0231 Cb medulloblastoma GAAAGGAAAC (7) 13.9 0.0139 Cb medulloblastoma CAATAGAGAC 2.3 0.0023 Cb medulloblastoma GCACCATCAG (2) 2.3 0.0023 Cb medulloblastoma GCCGCCTGGG (6) 2.3 0.0023 Cb medulloblastoma GGCGACAAGC (2) 2.3 0.0023 P8 GC+1d culture CAATAGAGAC 24 0.024 P8 GC+1d culture GGTGGGGGGG (15) 18.3 0.0183 P8 GC+1d culture GAAAGGAAAC (7) 13.7 0.0137 P8 GC+1d culture CAGATCAGCT (2) 3.4 0.0034 P8 GC+1d culture GGGAGGGAGG (4) 3.4 0.0034 P8 GC+1d culture GCCGCCTGGG (6) 1.1 0.0011 P8 GC+1d culture GGCGACAAGC (2) 1.1 0.0011 P8 GC+1d culture TAACCTGAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAGGAAAC (7) 24.6 0.0246 P8 GC+SHH+1d culture GGTGGGGGGG (15) 17.6 0.0176 P8 GC+SHH+1d culture CAATAGAGAC 12.9 0.0129 P8 GC+SHH+1d culture ATGAGGCTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCGCCTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGCGACAAGC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAGGGAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCTCTGCCA (6) 1.2 0.0012 3T3 fibroblasts CAATAGAGAC 42.1 0.0421 3T3 fibroblasts AACGTGCAGG 31.5 0.0315 3T3 fibroblasts GGTGGGGGGG (15) 10.5 0.0105 3T3 fibroblasts GCCGCCTGGG (6) 7 0.007 3T3 fibroblasts CAGATCAGCT (2) 3.5 0.0035 3T3 fibroblasts GAAAGGAAAC (7) 3.5 0.0035 3T3 fibroblasts GCACCATCAG (2) 3.5 0.0035 E15 cortex GGTGGGGGGG (15) 39.6 0.0396 E15 cortex GGGAGGGAGG (4) 14.8 0.0148 E15 cortex GCACCATCAG (2) 4.9 0.0049 P1 cortex CAATAGAGAC 22.7 0.0227 P1 cortex AGAAGCAGGT (6) 9.1 0.0091 P1 cortex GGTGGGGGGG (15) 9.1 0.0091 P1 cortex CAGATCAGCT (2) 4.5 0.0045 P1 cortex GCCGCCTGGG (6) 4.5 0.0045 Hypothalamus GGTGGGGGGG (15) 10.9 0.0109 Hypothalamus CAATAGAGAC 9.1 0.0091 Hypothalamus GGGAGGGAGG (4) 5.4 0.0054 Hypothalamus AACGTGCAGG 3.6 0.0036 Hypothalamus GCACCATCAG (2) 3.6 0.0036 E12.5 retina CAATAGAGAC 48.8 0.0488 E12.5 retina GAAAGGAAAC (7) 37.5 0.0375 E12.5 retina GGTGGGGGGG (15) 11.3 0.0113 E12.5 retina AACGTGCAGG 1.9 0.0019 E12.5 retina CAGATCAGCT (2) 1.9 0.0019 E12.5 retina GGGAGGGAGG (4) 1.9 0.0019 E12.5 retina TAACCTGAAA (2) 1.9 0.0019 E14.5 retina GAAAGGAAAC (7) 18.2 0.0182 E14.5 retina CAATAGAGAC 9.1 0.0091 E14.5 retina GGTGGGGGGG (15) 5.5 0.0055 E14.5 retina GGGAGGGAGG (4) 3.6 0.0036 E14.5 retina AACGTGCAGG 1.8 0.0018 E14.5 retina GGGGCTTGCC (3) 1.8 0.0018 E16.5 retina CAATAGAGAC 54.3 0.0543 E16.5 retina GAAAGGAAAC (7) 18.1 0.0181 E16.5 retina GGTGGGGGGG (15) 5.4 0.0054 E16.5 retina AACGTGCAGG 1.8 0.0018 E16.5 retina GCACCATCAG (2) 1.8 0.0018 E16.5 retina GGGGCTTGCC (3) 1.8 0.0018 E18.5 retina CAATAGAGAC 23.6 0.0236 E18.5 retina GAAAGGAAAC (7) 20 0.02 E18.5 retina GGTGGGGGGG (15) 14.6 0.0146 E18.5 retina TAACCTGAAA (2) 1.8 0.0018 P0.5 retina CAATAGAGAC 78.5 0.0785 P0.5 retina GGTGGGGGGG (15) 19.6 0.0196 P0.5 retina GAAAGGAAAC (7) 5.9 0.0059 P0.5 retina CAGATCAGCT (2) 3.9 0.0039 P0.5 retina AACGTGCAGG 2 0.002 P0.5 retina AGAAGCAGGT (6) 2 0.002 P0.5 retina ATGAGGCTGG (3) 2 0.002 P0.5 retina GGCGACAAGC (2) 2 0.002 P2.5 retina CAATAGAGAC 42.2 0.0422 P2.5 retina GGTGGGGGGG (15) 24.6 0.0246 P2.5 retina GAAAGGAAAC (7) 19.4 0.0194 P2.5 retina AACGTGCAGG 5.3 0.0053 P2.5 retina GGGAGGGAGG (4) 3.5 0.0035 P2.5 retina ATGAGGCTGG (3) 1.8 0.0018 P2.5 retina GGCGACAAGC (2) 1.8 0.0018 P2.5 retina TTCTCTGCCA (6) 1.8 0.0018 P4.5 retina CAATAGAGAC 25.8 0.0258 P4.5 retina GGTGGGGGGG (15) 15.9 0.0159 P4.5 retina GAAAGGAAAC (7) 5.9 0.0059 P4.5 retina GCACCATCAG (2) 4 0.004 P4.5 retina AACGTGCAGG 2 0.002 P4.5 retina GCCGCCTGGG (6) 2 0.002 P4.5 retina GGGAGGGAGG (4) 2 0.002 P4.5 retina GGTCCCTGTG (4) 2 0.002 P4.5 retina TTCTCTGCCA (6) 2 0.002 P6.5 retina CAATAGAGAC 43.4 0.0434 P6.5 retina GGTGGGGGGG (15) 15 0.015 P6.5 retina GAAAGGAAAC (7) 8.3 0.0083 P6.5 retina AACGTGCAGG 3.3 0.0033 P6.5 retina CAGATCAGCT (2) 1.7 0.0017 P6.5 retina GCACCATCAG (2) 1.7 0.0017 P6.5 retina GGCGACAAGC (2) 1.7 0.0017 P6.5 retina TAACCTGAAA (2) 1.7 0.0017 P6.5 retina TTCTCTGCCA (6) 1.7 0.0017 P10.5 crx- retina GGTGGGGGGG (15) 13 0.013 P10.5 crx- retina CAATAGAGAC 11.1 0.0111 P10.5 crx- retina GAAAGGAAAC (7) 5.6 0.0056 P10.5 crx- retina AACGTGCAGG 3.7 0.0037 P10.5 crx- retina ATGAGGCTGG (3) 1.9 0.0019 P10.5 crx- retina GCCGCCTGGG (6) 1.9 0.0019 P10.5 crx+ retina GGTGGGGGGG (15) 30.8 0.0308 P10.5 crx+ retina GCCGCCTGGG (6) 11.5 0.0115 P10.5 crx+ retina CAATAGAGAC 3.8 0.0038 P10.5 crx+ retina GAAAGGAAAC (7) 3.8 0.0038 P10.5 crx+ retina GGGAGGGAGG (4) 3.8 0.0038 P10.5 crx+ retina AACGTGCAGG 1.9 0.0019 Adult retinal CAATAGAGAC 109.2 0.1092 Adult retinal GGTGGGGGGG (15) 13 0.013 Adult retinal AACGTGCAGG 7.4 0.0074 Adult retinal GCCGCCTGGG (6) 3.7 0.0037 Adult retinal CAGATCAGCT (2) 1.9 0.0019 Adult retinal GGCGACAAGC (2) 1.9 0.0019 Adult retinal GGGGCTTGCC (3) 1.9 0.0019 Adult retinal TAACCTGAAA (2) 1.9 0.0019 ONL CAATAGAGAC 59.4 0.0594 ONL GGTGGGGGGG (15) 15.3 0.0153 ONL TAACCTGAAA (2) 5.7 0.0057 ONL GAAAGGAAAC (7) 3.8 0.0038 ONL GGTCCCTGTG (4) 3.8 0.0038 ONL GCCGCCTGGG (6) 1.9 0.0019 ONL GGGAGGGAGG (4) 1.9 0.0019 ONL GGGGCTTGCC (3) 1.9 0.0019