Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.32373
3110057O12Rik
RIKEN cDNA 3110057O12 gene
3
269423
Gene Ontology
DNA binding
|
hydrolase activity
Human Homolog
FLJ21106[hypothetical protein FLJ21106]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCCAGTTGG (
6
)
4.9
0.0049
P8 Cb GC
CCTTTAATTC (
36
)
1.6
0.0016
P8 Cb GC
GGCCAGTTTG
1.6
0.0016
P8 Cb GC
GTTTATTAAA (
7
)
1.6
0.0016
Cb medulloblastoma
GGCCAGTTGG (
6
)
18.5
0.0185
Cb medulloblastoma
CCTTTAATTC (
36
)
4.6
0.0046
Cb medulloblastoma
GTTTATTAAA (
7
)
2.3
0.0023
P8 GC+1d culture
GGCCAGTTGG (
6
)
3.4
0.0034
P8 GC+1d culture
TTTTATTAAA
(
7
)
3.4
0.0034
P8 GC+1d culture
GTTTATTAAA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTATTAAA (
7
)
8.2
0.0082
P8 GC+SHH+1d culture
CCTTTAATTC (
36
)
7
0.007
P8 GC+SHH+1d culture
GGCCAGTTGG (
6
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTTATTAAA
(
7
)
5.9
0.0059
P8 GC+SHH+1d culture
GGCCAGTTTG
1.2
0.0012
3T3 fibroblasts
GGCCAGTTGG (
6
)
21
0.021
3T3 fibroblasts
CCTTTAATTC (
36
)
7
0.007
E15 cortex
GGCCAGTTGG (
6
)
14.8
0.0148
E15 cortex
GGCCAGTTTG
4.9
0.0049
P1 cortex
CCTTTAATTC (
36
)
13.6
0.0136
P1 cortex
GGCCAGTTGG (
6
)
4.5
0.0045
P1 cortex
TTTTATTAAA
(
7
)
4.5
0.0045
Hypothalamus
GGCCAGTTGG (
6
)
5.4
0.0054
Hypothalamus
GTTTATTAAA (
7
)
5.4
0.0054
Hypothalamus
GTAACTAACT
1.8
0.0018
E12.5 retina
TTTTATTAAA
(
7
)
5.6
0.0056
E12.5 retina
CCTTTAATTC (
36
)
3.8
0.0038
E12.5 retina
CCTTTTATCC
(
8
)
1.9
0.0019
E12.5 retina
GGCCAGTTGG (
6
)
1.9
0.0019
E12.5 retina
GTTTATTAAA (
7
)
1.9
0.0019
E14.5 retina
CCTTTAATTC (
36
)
7.3
0.0073
E14.5 retina
GTTTATTAAA (
7
)
1.8
0.0018
E14.5 retina
TTTTATTAAA
(
7
)
1.8
0.0018
E16.5 retina
CCTTTTATCC
(
8
)
5.4
0.0054
E16.5 retina
TTTTATTAAA
(
7
)
5.4
0.0054
E16.5 retina
CCTTTAATTC (
36
)
3.6
0.0036
E16.5 retina
GGCCAGTTGG (
6
)
3.6
0.0036
E16.5 retina
GTTTATTAAA (
7
)
3.6
0.0036
E18.5 retina
GGCCAGTTGG (
6
)
3.6
0.0036
E18.5 retina
GTTTATTAAA (
7
)
3.6
0.0036
E18.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
E18.5 retina
TTTTATTAAA
(
7
)
1.8
0.0018
P0.5 retina
GGCCAGTTGG (
6
)
9.8
0.0098
P0.5 retina
CCTTTAATTC (
36
)
5.9
0.0059
P0.5 retina
GTTTATTAAA (
7
)
2
0.002
P2.5 retina
TTTTATTAAA
(
7
)
5.3
0.0053
P2.5 retina
GTTTATTAAA (
7
)
3.5
0.0035
P2.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
P4.5 retina
GTTTATTAAA (
7
)
7.9
0.0079
P4.5 retina
TTTTATTAAA
(
7
)
7.9
0.0079
P4.5 retina
CCTTTAATTC (
36
)
4
0.004
P4.5 retina
GGCCAGTTGG (
6
)
4
0.004
P6.5 retina
CCTTTAATTC (
36
)
5
0.005
P6.5 retina
GGCCAGTTGG (
6
)
5
0.005
P6.5 retina
TTTTATTAAA
(
7
)
5
0.005
P6.5 retina
CCTTTTATCC
(
8
)
1.7
0.0017
P10.5 crx- retina
GGCCAGTTGG (
6
)
14.9
0.0149
P10.5 crx- retina
CCTTTAATTC (
36
)
1.9
0.0019
P10.5 crx- retina
GGCCAGTTTG
1.9
0.0019
P10.5 crx- retina
GTTTATTAAA (
7
)
1.9
0.0019
P10.5 crx- retina
TTTTATTAAA
(
7
)
1.9
0.0019
P10.5 crx+ retina
GGCCAGTTGG (
6
)
17.3
0.0173
P10.5 crx+ retina
GGCCAGTTTG
1.9
0.0019
P10.5 crx+ retina
TTTTATTAAA
(
7
)
1.9
0.0019
Adult retinal
GGCCAGTTGG (
6
)
5.6
0.0056
Adult retinal
GGCCAGTTTG
3.7
0.0037
Adult retinal
CCTTTAATTC (
36
)
1.9
0.0019
Adult retinal
CCTTTTATCC
(
8
)
1.9
0.0019
ONL
CCTTTAATTC (
36
)
3.8
0.0038
ONL
CCTTTTATCC
(
8
)
3.8
0.0038
