Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.324242	2900097C17Rik	RIKEN cDNA 2900097C17 gene	2		347740
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACATACTG (2) 4.9 0.0049 P8 Cb GC ATAGACCTGA (2) 3.3 0.0033 P8 Cb GC GTGTATTCCT (2) 3.3 0.0033 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC TCCTCATCTG (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma GTACATACTG (2) 4.6 0.0046 Cb medulloblastoma AGTGTTTGCA (2) 2.3 0.0023 Cb medulloblastoma CCTTTAACTC (2) 2.3 0.0023 Cb medulloblastoma GTGAAGTGTT (2) 2.3 0.0023 P8 GC+1d culture GTACATACTG (2) 14.8 0.0148 P8 GC+1d culture AGTGTTTGCA (2) 5.7 0.0057 P8 GC+1d culture GTGTATTCCT (2) 2.3 0.0023 P8 GC+1d culture ATAGACCTGA (2) 1.1 0.0011 P8 GC+1d culture GGAGAGAGAA (11) 1.1 0.0011 P8 GC+1d culture TGCTTTCCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture GTACATACTG (2) 21.1 0.0211 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture CTGTAAATAC (2) 4.7 0.0047 P8 GC+SHH+1d culture GTGTATTCCT (2) 3.5 0.0035 P8 GC+SHH+1d culture ATAGACCTGA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGAGAGAGAA (11) 1.2 0.0012 3T3 fibroblasts AGTGTTTGCA (2) 7 0.007 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts GTACATACTG (2) 3.5 0.0035 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex GTACATACTG (2) 9.1 0.0091 P1 cortex CTGTAAATAC (2) 4.5 0.0045 P1 cortex TAACTTTGCT (4) 4.5 0.0045 P1 cortex TTAAAAAATA (5) 4.5 0.0045 Hypothalamus GTACATACTG (2) 16.3 0.0163 Hypothalamus CTGTAAATAC (2) 10.9 0.0109 Hypothalamus AGTGTTTGCA (2) 9.1 0.0091 Hypothalamus CCATCTCAAT 5.4 0.0054 Hypothalamus GTGTATTCCT (2) 5.4 0.0054 Hypothalamus TAGTGTGTGT (5) 5.4 0.0054 Hypothalamus GTGGAATTGC (5) 3.6 0.0036 Hypothalamus ATAGACCTGA (2) 1.8 0.0018 Hypothalamus GTGAAGTGTT (2) 1.8 0.0018 Hypothalamus GTGTATTCTT (3) 1.8 0.0018 Hypothalamus TAACTTTGCT (4) 1.8 0.0018 Hypothalamus TTAAAAAATA (5) 1.8 0.0018 Hypothalamus TTGCTAGGCT 1.8 0.0018 E12.5 retina GTACATACTG (2) 13.1 0.0131 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina AGTGTTTGCA (2) 1.9 0.0019 E12.5 retina CCTTTAACTC (2) 1.9 0.0019 E12.5 retina CTGTAAATAC (2) 1.9 0.0019 E12.5 retina GGAGAGAGAA (11) 1.9 0.0019 E12.5 retina GTGTATTCCT (2) 1.9 0.0019 E12.5 retina TAGTGTGTGT (5) 1.9 0.0019 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina ATAGACCTGA (2) 1.8 0.0018 E14.5 retina GCCTGGGGGG (4) 1.8 0.0018 E14.5 retina TCCTCATCTG (3) 1.8 0.0018 E16.5 retina ATAGACCTGA (2) 3.6 0.0036 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina CCATCTCAAT 1.8 0.0018 E16.5 retina GTACATACTG (2) 1.8 0.0018 E16.5 retina GTGGAATTGC (5) 1.8 0.0018 E16.5 retina GTGTATTCCT (2) 1.8 0.0018 E16.5 retina TGCTTTCCTT (3) 1.8 0.0018 E16.5 retina TTGCTAGGCT 1.8 0.0018 E18.5 retina ATAGACCTGA (2) 3.6 0.0036 E18.5 retina GTACATACTG (2) 3.6 0.0036 E18.5 retina AGTGTTTGCA (2) 1.8 0.0018 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina GCCTGGGGGG (4) 1.8 0.0018 E18.5 retina TAGTGTGTGT (5) 1.8 0.0018 E18.5 retina TGCTTTCCTT (3) 1.8 0.0018 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina ATAGACCTGA (2) 3.9 0.0039 P0.5 retina GTACATACTG (2) 2 0.002 P0.5 retina GTGTATTCTT (3) 2 0.002 P0.5 retina TTGCTAGGCT 2 0.002 P2.5 retina GTACATACTG (2) 8.8 0.0088 P2.5 retina GTGTATTCCT (2) 3.5 0.0035 P2.5 retina ATAGACCTGA (2) 1.8 0.0018 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina CTGTAAATAC (2) 1.8 0.0018 P2.5 retina GGAGAGAGAA (11) 1.8 0.0018 P2.5 retina TTAAAAAATA (5) 1.8 0.0018 P4.5 retina ATAGACCTGA (2) 9.9 0.0099 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina GTACATACTG (2) 4 0.004 P4.5 retina GTGTATTCCT (2) 4 0.004 P4.5 retina GGAGAGAGAA (11) 2 0.002 P6.5 retina GTACATACTG (2) 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina TAACTTTGCT (4) 5 0.005 P6.5 retina CCTTTAACTC (2) 3.3 0.0033 P6.5 retina ATAGACCTGA (2) 1.7 0.0017 P6.5 retina CTGTAAATAC (2) 1.7 0.0017 P6.5 retina GTGAAGTGTT (2) 1.7 0.0017 P6.5 retina GTGTATTCTT (3) 1.7 0.0017 P10.5 crx- retina GTACATACTG (2) 7.4 0.0074 P10.5 crx- retina GTGAAGTGTT (2) 5.6 0.0056 P10.5 crx- retina ATAGACCTGA (2) 1.9 0.0019 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina GTGTATTCTT (3) 1.9 0.0019 P10.5 crx- retina TAACTTTGCT (4) 1.9 0.0019 P10.5 crx+ retina GTACATACTG (2) 3.8 0.0038 Adult retinal GTACATACTG (2) 9.3 0.0093 Adult retinal TTGCTAGGCT 3.7 0.0037 Adult retinal AGTGTTTGCA (2) 1.9 0.0019 Adult retinal ATAGACCTGA (2) 1.9 0.0019 Adult retinal CCATCTCAAT 1.9 0.0019 Adult retinal CCTTTAACTC (2) 1.9 0.0019 Adult retinal CCTTTAATTC (36) 1.9 0.0019 ONL CCTTTAATTC (36) 3.8 0.0038 ONL GTACATACTG (2) 3.8 0.0038 ONL TCCTCATCTG (3) 3.8 0.0038 ONL ATAGACCTGA (2) 1.9 0.0019 ONL GTGTATTCCT (2) 1.9 0.0019 ONL TAACTTTGCT (4) 1.9 0.0019 ONL TAGTGTGTGT (5) 1.9 0.0019