Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.325584	Rps6	ribosomal protein S6	4		20104
Gene Ontology	cytoplasm | cytosolic ribosome (sensu Eukarya) | cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome | structural constituent of ribosome
Human Homolog	RPS6[ribosomal protein S6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGAGTGCG (3) 16.3 0.0163 P8 Cb GC CGCTTCTCAT 3.3 0.0033 P8 Cb GC AAACCTAACT (2) 1.6 0.0016 P8 Cb GC GAAGAGTGAG (3) 1.6 0.0016 P8 Cb GC GCCACGGAAG (3) 1.6 0.0016 Cb medulloblastoma GCAGAGTGCG (3) 9.2 0.0092 Cb medulloblastoma GAAGAGTGAG (3) 2.3 0.0023 Cb medulloblastoma GGAAACCCTG (10) 2.3 0.0023 P8 GC+1d culture GCAGAGTGCG (3) 47.9 0.0479 P8 GC+1d culture AGAGCTTTAA (11) 1.1 0.0011 P8 GC+1d culture CGCTTCTCAT 1.1 0.0011 P8 GC+1d culture GAAGAGTGAG (3) 1.1 0.0011 P8 GC+1d culture GGAAACCCTG (10) 1.1 0.0011 P8 GC+1d culture GTTGTTACCA (3) 1.1 0.0011 P8 GC+1d culture GTTTCAGCAC (3) 1.1 0.0011 P8 GC+SHH+1d culture GCAGAGTGCG (3) 51.5 0.0515 P8 GC+SHH+1d culture AGAGCTTTAA (11) 3.5 0.0035 P8 GC+SHH+1d culture CGCTTCTCAT 3.5 0.0035 P8 GC+SHH+1d culture GAAGAGTGAG (3) 1.2 0.0012 3T3 fibroblasts GCAGAGTGCG (3) 168.2 0.1682 3T3 fibroblasts GCCAGAGTGC (4) 3.5 0.0035 E15 cortex GCAGAGTGCG (3) 103.9 0.1039 E15 cortex GCCAGAGTGC (4) 9.9 0.0099 E15 cortex AAGCAAGGTG (5) 4.9 0.0049 P1 cortex GCAGAGTGCG (3) 40.9 0.0409 P1 cortex AGAGCTTTAA (11) 4.5 0.0045 Hypothalamus GCAGAGTGCG (3) 21.7 0.0217 Hypothalamus AAGCAAGGTG (5) 5.4 0.0054 Hypothalamus CGCTTCTCAT 3.6 0.0036 Hypothalamus GTTTCAGCAC (3) 1.8 0.0018 E12.5 retina GCAGAGTGCG (3) 22.5 0.0225 E12.5 retina CGCTTCTCAT 16.9 0.0169 E12.5 retina GTTTCAGCAC (3) 1.9 0.0019 E14.5 retina GCAGAGTGCG (3) 10.9 0.0109 E14.5 retina AAGCAAGGTG (5) 5.5 0.0055 E14.5 retina CGCTTCTCAT 1.8 0.0018 E16.5 retina GCAGAGTGCG (3) 18.1 0.0181 E16.5 retina CGCTTCTCAT 3.6 0.0036 E16.5 retina GCCACGGAAG (3) 3.6 0.0036 E16.5 retina AAGCAAGGTG (5) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GCCAGAGTGC (4) 1.8 0.0018 E18.5 retina GCAGAGTGCG (3) 18.2 0.0182 E18.5 retina AAGCAAGGTG (5) 1.8 0.0018 E18.5 retina AGAGCTTTAA (11) 1.8 0.0018 E18.5 retina CGCTTCTCAT 1.8 0.0018 E18.5 retina GGAAACCCTG (10) 1.8 0.0018 P0.5 retina GCAGAGTGCG (3) 56.9 0.0569 P0.5 retina CGCTTCTCAT 5.9 0.0059 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina GCAGAGTGCG (3) 8.8 0.0088 P2.5 retina CGCTTCTCAT 3.5 0.0035 P2.5 retina AGAGCTTTAA (11) 1.8 0.0018 P4.5 retina GCAGAGTGCG (3) 17.8 0.0178 P6.5 retina GCAGAGTGCG (3) 11.7 0.0117 P6.5 retina AGAGCTTTAA (11) 3.3 0.0033 P6.5 retina GGAAACCCTG (10) 3.3 0.0033 P6.5 retina AAACCTAACT (2) 1.7 0.0017 P6.5 retina GCCAGAGTGC (4) 1.7 0.0017 P10.5 crx- retina GCAGAGTGCG (3) 33.4 0.0334 P10.5 crx- retina GCCACGGAAG (3) 1.9 0.0019 P10.5 crx- retina GGAAACCCTG (10) 1.9 0.0019 P10.5 crx+ retina GCAGAGTGCG (3) 25 0.025 P10.5 crx+ retina GGAAACCCTG (10) 3.8 0.0038 P10.5 crx+ retina GTTTCAGCAC (3) 3.8 0.0038 P10.5 crx+ retina GAAGAGTGAG (3) 1.9 0.0019 P10.5 crx+ retina GCCACGGAAG (3) 1.9 0.0019 Adult retinal GCAGAGTGCG (3) 38.9 0.0389 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GTTTCAGCAC (3) 3.7 0.0037 Adult retinal AAGCAAGGTG (5) 1.9 0.0019 Adult retinal CGCTTCTCAT 1.9 0.0019 Adult retinal GCCAGAGTGC (4) 1.9 0.0019 Adult retinal GGAAACCCTG (10) 1.9 0.0019 ONL GCAGAGTGCG (3) 19.2 0.0192 ONL AAACCTAACT (2) 3.8 0.0038 ONL GGAAACCCTG (10) 1.9 0.0019 ONL GTTGTTACCA (3) 1.9 0.0019 ONL GTTTCAGCAC (3) 1.9 0.0019